RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 RAB23Q9ULC3 237 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 CCL26Q9Y258 94 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 MYOFQ9NZM1 2061 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 IGF2RP11717 2491 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 MYBPHLA2RUH7 354 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 CHURC1-FNTBB4DL54 471 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 EIF3DO15371 548 aaKnown RBP eCLIP7.16□□□□□ -1.26
PSEN1-216ENST00000556066 F13A1P00488 732 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 F11P03951 625 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 CKMP06732 381 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 PDGFRBP09619 1106 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 LMO2P25791 158 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 DDX6P26196 483 aaKnown RBP eCLIP7.16□□□□□ -1.26
PSEN1-216ENST00000556066 FNTBP49356 437 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 MLLT6P55198 1093 aaPredicted RBP7.16□□□□□ -1.26
PSEN1-216ENST00000556066 CYP27A1Q02318 531 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 GAS6Q14393 721 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 PUM1Q14671 1186 aaKnown RBP eCLIP7.16□□□□□ -1.26
PSEN1-216ENST00000556066 SNRNP35Q16560 246 aaKnown RBP7.16□□□□□ -1.26
PSEN1-216ENST00000556066 ITPRIPL2Q3MIP1 535 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 TRIM68Q6AZZ1 485 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 CC2D1AQ6P1N0 951 aaPredicted RBP7.16□□□□□ -1.26
PSEN1-216ENST00000556066 C1orf228Q6PIY5 440 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 PRR23BQ6ZRT6 265 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 Q6ZS52 159 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 HS2ST1Q7LGA3 356 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 TRAPPC11Q7Z392 1133 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 WDR49Q8IV35 697 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 SPEM1Q8N4L4 309 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 TOP6BLQ8N6T0 577 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 CXorf38Q8TB03 319 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 ZNF507Q8TCN5 953 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 LEO1Q8WVC0 666 aaPredicted RBP7.16□□□□□ -1.26
PSEN1-216ENST00000556066 GLMNQ92990 594 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 USP13Q92995 863 aaPredicted RBP7.16□□□□□ -1.26
PSEN1-216ENST00000556066 MSANTD3Q96H12 275 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 FNBP1Q96RU3 617 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 C7orf25Q9BPX7 421 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 SYT15Q9BQS2 421 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 IER2Q9BTL4 223 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 FAM126AQ9BYI3 521 aaPredicted RBP7.16□□□□□ -1.26
PSEN1-216ENST00000556066 EBF3Q9H4W6 596 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 KIAA1586Q9HCI6 787 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 ABCB6Q9NP58 842 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 SLC39A2Q9NP94 309 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 AGPAT3Q9NRZ7 376 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 TDP1Q9NUW8 608 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 FAM13BQ9NYF5 915 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 UXTQ9UBK9 157 aaPredicted RBP7.16□□□□□ -1.26
PSEN1-216ENST00000556066 NXF1Q9UBU9 619 aaKnown RBP7.16□□□□□ -1.26
PSEN1-216ENST00000556066 ZMYM5Q9UJ78 669 aa7.16□□□□□ -1.26
PSEN1-216ENST00000556066 MYO16Q9Y6X6 1858 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 TRAV19A0A0A6YYK7 116 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 GABRDO14764 452 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 TGFB1I1O43294 461 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 LILRB5O75023 590 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 PHACTR2O75167 634 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 ARSAP15289 507 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 BDNFP23560 247 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 ANXA13P27216 316 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 WEE1P30291 646 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 DEKP35659 375 aaKnown RBP7.15□□□□□ -1.26
PSEN1-216ENST00000556066 GRIK1P39086 918 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 SH3BP2P78314 561 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 DNM1Q05193 864 aaKnown RBP7.15□□□□□ -1.26
PSEN1-216ENST00000556066 DMWDQ09019 674 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 SRSF5Q13243 272 aaKnown RBP7.15□□□□□ -1.26
PSEN1-216ENST00000556066 TRPC3Q13507 836 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 CUL4BQ13620 913 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 RUNX3Q13761 415 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 PKP1Q13835 747 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 LINC01559Q495D7 138 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 WDR44Q5JSH3 913 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 DGKKQ5KSL6 1271 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 C4orf50Q6ZRC1 276 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 UNC13DQ70J99 1090 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 EPM2AIP1Q7L775 607 aaPredicted RBP7.15□□□□□ -1.26
PSEN1-216ENST00000556066 DPH6Q7L8W6 267 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 MON1AQ86VX9 555 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 BPHLQ86WA6 291 aaPredicted RBP7.15□□□□□ -1.26
PSEN1-216ENST00000556066 GRAMD1CQ8IYS0 662 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 CEP57L1Q8IYX8 460 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 FSIP1Q8NA03 581 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 XXYLT1Q8NBI6 393 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 OR6B3Q8NGW1 331 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 SPATA18Q8TC71 538 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 SCFD1Q8WVM8 642 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 KBTBD7Q8WVZ9 684 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 NELL1Q92832 810 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 MYLPFQ96A32 169 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 CALR3Q96L12 384 aaKnown RBP7.15□□□□□ -1.26
PSEN1-216ENST00000556066 SPATA32Q96LK8 384 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 CYP2S1Q96SQ9 504 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 PKMYT1Q99640 499 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 ARHGAP9Q9BRR9 750 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 EPC1Q9H2F5 836 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 SNX25Q9H3E2 840 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 KIF9Q9HAQ2 790 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 MAGEF1Q9HAY2 307 aa7.15□□□□□ -1.26
PSEN1-216ENST00000556066 HPS4Q9NQG7 708 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms