RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 DNAJC25Q9H1X3 360 aa8.28□□□□□ -1.08
PSEN1-215ENST00000556011 ITM2CQ9NQX7 267 aa8.28□□□□□ -1.08
PSEN1-215ENST00000556011 USP36Q9P275 1121 aaKnown RBP8.28□□□□□ -1.08
PSEN1-215ENST00000556011 ARPP21Q9UBL0 812 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-215ENST00000556011 OSGIN2Q9Y236 505 aa8.28□□□□□ -1.08
PSEN1-215ENST00000556011 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-215ENST00000556011 RAD54BQ9Y620 910 aa8.28□□□□□ -1.08
PSEN1-215ENST00000556011 SDC3O75056 442 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 ITGA4P13612 1032 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 VARSP26640 1264 aaKnown RBP8.27□□□□□ -1.09
PSEN1-215ENST00000556011 TNFRSF4P43489 277 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 IFNAR2P48551 515 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 TPMTP51580 245 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 FOLH1Q04609 750 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 KDSRQ06136 332 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 CDC20Q12834 499 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 CDC37Q16543 378 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-215ENST00000556011 RAB11FIP2Q7L804 512 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 FEM1CQ96JP0 617 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 PNKPQ96T60 521 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 LINC00597Q9H2U6 94 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 SLAMF7Q9NQ25 335 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 PISDQ9UG56 409 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 TLK1Q9UKI8 766 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 HCN2Q9UL51 889 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 KCNMB2Q9Y691 235 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 SLC4A4Q9Y6R1 1079 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 COL7A1Q02388 2944 aa8.27□□□□□ -1.09
PSEN1-215ENST00000556011 STAM2O75886 525 aa8.26□□□□□ -1.09
PSEN1-215ENST00000556011 IGFBP6P24592 240 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-215ENST00000556011 TKTP29401 623 aaKnown RBP8.26□□□□□ -1.09
PSEN1-215ENST00000556011 NTSR1P30989 418 aa8.26□□□□□ -1.09
PSEN1-215ENST00000556011 CDK18Q07002 472 aa8.26□□□□□ -1.09
PSEN1-215ENST00000556011 MTF1Q14872 753 aa8.26□□□□□ -1.09
PSEN1-215ENST00000556011 DCAF10Q5QP82 559 aa8.26□□□□□ -1.09
PSEN1-215ENST00000556011 ATP1A1-AS1Q5TC04 95 aa8.26□□□□□ -1.09
PSEN1-215ENST00000556011 EFCAB12Q6NXP0 572 aa8.26□□□□□ -1.09
PSEN1-215ENST00000556011 WDR63Q8IWG1 891 aa8.26□□□□□ -1.09
PSEN1-215ENST00000556011 PLD6Q8N2A8 252 aaKnown RBP8.26□□□□□ -1.09
PSEN1-215ENST00000556011 SMG8Q8ND04 991 aaKnown RBP8.26□□□□□ -1.09
PSEN1-215ENST00000556011 NKD1Q969G9 470 aa8.26□□□□□ -1.09
PSEN1-215ENST00000556011 SNRNP40Q96DI7 357 aaKnown RBP8.26□□□□□ -1.09
PSEN1-215ENST00000556011 UBN1Q9NPG3 1134 aa8.26□□□□□ -1.09
PSEN1-215ENST00000556011 IL17RBQ9NRM6 502 aa8.26□□□□□ -1.09
PSEN1-215ENST00000556011 TDP1Q9NUW8 608 aa8.26□□□□□ -1.09
PSEN1-215ENST00000556011 TRPS1Q9UHF7 1281 aa8.26□□□□□ -1.09
PSEN1-215ENST00000556011 FHOD1Q9Y613 1164 aa8.26□□□□□ -1.09
PSEN1-215ENST00000556011 HRNRQ86YZ3 2850 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-215ENST00000556011 MDC1Q14676 2089 aaKnown RBP8.25□□□□□ -1.09
PSEN1-215ENST00000556011 A0A0A0MRY4 1105 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 A0A1W2PQ27 194 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 A0A1W2PQ64 194 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 A0A1W2PQC6 194 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 CASTOR2A6NHX0 329 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 IPO5O00410 1097 aaKnown RBP8.25□□□□□ -1.09
PSEN1-215ENST00000556011 DNAJB5O75953 348 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 P4HBP07237 508 aaKnown RBP8.25□□□□□ -1.09
PSEN1-215ENST00000556011 SFPQP23246 707 aaKnown RBP eCLIP8.25□□□□□ -1.09
PSEN1-215ENST00000556011 OXTRP30559 389 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 AVPR1AP37288 418 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 GHRHRQ02643 423 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 ELAVL2Q12926 359 aaKnown RBP8.25□□□□□ -1.09
PSEN1-215ENST00000556011 CRTC1Q6UUV9 634 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 ANKS3Q6ZW76 656 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 TRMT11Q7Z4G4 463 aaKnown RBP8.25□□□□□ -1.09
PSEN1-215ENST00000556011 METTL3Q86U44 580 aaKnown RBP8.25□□□□□ -1.09
PSEN1-215ENST00000556011 FAM124AQ86V42 546 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 KSR1Q8IVT5 923 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 GSTCDQ8NEC7 633 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 IFI44Q8TCB0 444 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 BIRC7Q96CA5 298 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 ACOX2Q99424 681 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 ORAI3Q9BRQ5 295 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 NUP58Q9BVL2 599 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 GDF3Q9NR23 364 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 ARHGEF4Q9NR80 690 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 YIPF1Q9Y548 306 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 PCDHGB7Q9Y5F8 929 aa8.25□□□□□ -1.09
PSEN1-215ENST00000556011 LY6G6EA0A0G2JKS1 128 aa8.24□□□□□ -1.09
PSEN1-215ENST00000556011 MTMR11A4FU01 709 aa8.24□□□□□ -1.09
PSEN1-215ENST00000556011 MYMKA6NI61 221 aa8.24□□□□□ -1.09
PSEN1-215ENST00000556011 ZNF213O14771 459 aa8.24□□□□□ -1.09
PSEN1-215ENST00000556011 FANCGO15287 622 aa8.24□□□□□ -1.09
PSEN1-215ENST00000556011 CD27P26842 260 aa8.24□□□□□ -1.09
PSEN1-215ENST00000556011 JMJD6Q6NYC1 403 aaPredicted RBP8.24□□□□□ -1.09
PSEN1-215ENST00000556011 CATSPER4Q7RTX7 472 aa8.24□□□□□ -1.09
PSEN1-215ENST00000556011 CIARTQ8N365 385 aaPredicted RBP8.24□□□□□ -1.09
PSEN1-215ENST00000556011 ALPK1Q96QP1 1244 aa8.24□□□□□ -1.09
PSEN1-215ENST00000556011 GCOM2Q9BZD3 368 aaPredicted RBP8.24□□□□□ -1.09
PSEN1-215ENST00000556011 UBA5Q9GZZ9 404 aa8.24□□□□□ -1.09
PSEN1-215ENST00000556011 EPB41L5Q9HCM4 733 aa8.24□□□□□ -1.09
PSEN1-215ENST00000556011 TNFRSF10DQ9UBN6 386 aa8.24□□□□□ -1.09
PSEN1-215ENST00000556011 HES2Q9Y543 173 aa8.24□□□□□ -1.09
PSEN1-215ENST00000556011 U3KQA8 63 aa8.24□□□□□ -1.09
PSEN1-215ENST00000556011 MYH9P35579 1960 aaKnown RBP8.23□□□□□ -1.09
PSEN1-215ENST00000556011 TBC1D3BA6NDS4 549 aa8.23□□□□□ -1.09
PSEN1-215ENST00000556011 AGRPO00253 132 aa8.23□□□□□ -1.09
PSEN1-215ENST00000556011 VAMP4O75379 141 aa8.23□□□□□ -1.09
PSEN1-215ENST00000556011 ITIH1P19827 911 aa8.23□□□□□ -1.09
PSEN1-215ENST00000556011 CFPP27918 469 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms