RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 COMMD8Q9NX08 183 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 IL37Q9NZH6 218 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 NXF1Q9UBU9 619 aaKnown RBP13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 ATP6V1DQ9Y5K8 247 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 WNT6Q9Y6F9 365 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 GREB1Q4ZG55 1949 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 CEP250Q9BV73 2442 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 A0A1B0GVL5 298 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 A0A1W2PQ27 194 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 A0A1W2PQ64 194 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 A0A1W2PQD8 194 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 FAM92AA1XBS5 289 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 LEFTY2O00292 366 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 SLC9A3R1O14745 358 aaPredicted RBP13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 CALUO43852 315 aaPredicted RBP13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 RNF40O75150 1001 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 VNN1O95497 513 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 EGFP01133 1207 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 EIF2DP41214 584 aaKnown RBP13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 CASP4P49662 377 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 TUBP50607 506 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 MCCD1P59942 119 aaPredicted RBP13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 ZXDBP98169 803 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 CSRP2Q16527 193 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 RSPO4Q2I0M5 234 aaPredicted RBP13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 PKN3Q6P5Z2 889 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 PRR23BQ6ZRT6 265 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 UNC93AQ86WB7 457 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 GAB3Q8WWW8 586 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 CCDC47Q96A33 483 aaKnown RBP13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 ACDQ96AP0 544 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 SMARCD1Q96GM5 515 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 ZNF518BQ9C0D4 1074 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 SMYD3Q9H7B4 428 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 FBRSL1Q9HCM7 1045 aaKnown RBP13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 PARD6AQ9NPB6 346 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 TMEM30AQ9NV96 361 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 SLC8A2Q9UPR5 921 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 FRMD4BQ9Y2L6 1034 aa13.5□□□□□ -0.25
HNRNPC-221ENST00000555883 TNFRSF10BO14763 440 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 ASS1P00966 412 aaKnown RBP13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 YWHAQP27348 245 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 SYKP43405 635 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 CACNA2D1P54289 1103 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 TAF10Q12962 218 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 FAM35AQ86V20 835 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 ADGRG2Q8IZP9 1017 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 CRYBG2Q8N1P7 616 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 OTUB2Q96DC9 234 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 ZC3H10Q96K80 434 aaKnown RBP13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 RTKNQ9BST9 563 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 RNF38Q9H0F5 515 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 CSNK1G1Q9HCP0 422 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 DMAP1Q9NPF5 467 aaPredicted RBP13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 EBF1Q9UH73 591 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 CDV3Q9UKY7 258 aaKnown RBP13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 USP18Q9UMW8 372 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 ZDHHC9Q9Y397 364 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 ANAPC1Q9H1A4 1944 aa13.49□□□□□ -0.25
HNRNPC-221ENST00000555883 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 E2F8A0AVK6 867 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 RPP40O75818 363 aaKnown RBP13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 TRIM21P19474 475 aaKnown RBP13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 RAP1GAPP47736 663 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 NDUFA8P51970 172 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 CDH8P55286 799 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 DLG4P78352 724 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 SPEM2Q0P670 501 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 DPYDQ12882 1025 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 HEATR6Q6AI08 1181 aaKnown RBP13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 PAQR9Q6ZVX9 377 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 INTS8Q75QN2 995 aaKnown RBP13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 CEP68Q76N32 757 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 SV2AQ7L0J3 742 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 CACNA2D4Q7Z3S7 1137 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 GUF1Q8N442 669 aaKnown RBP13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 FAM160A2Q8N612 972 aaPredicted RBP13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 NETO1Q8TDF5 533 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 EZH1Q92800 747 aaPredicted RBP13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 FAXDC2Q96IV6 333 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 LINC00597Q9H2U6 94 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 SEMA4GQ9NTN9 838 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 TBC1D14Q9P2M4 693 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 CPQQ9Y646 472 aa13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 HELZP42694 1942 aaKnown RBP13.48□□□□□ -0.25
HNRNPC-221ENST00000555883 CLDN5O00501 218 aa13.47□□□□□ -0.25
HNRNPC-221ENST00000555883 ZDHHC11BP0C7U3 371 aa13.47□□□□□ -0.25
HNRNPC-221ENST00000555883 RPL13P26373 211 aaKnown RBP13.47□□□□□ -0.25
HNRNPC-221ENST00000555883 OPRD1P41143 372 aa13.47□□□□□ -0.25
HNRNPC-221ENST00000555883 ASPAP45381 313 aa13.47□□□□□ -0.25
HNRNPC-221ENST00000555883 VAMP7P51809 220 aa13.47□□□□□ -0.25
HNRNPC-221ENST00000555883 SLC5A3P53794 718 aa13.47□□□□□ -0.25
HNRNPC-221ENST00000555883 ATXN1P54253 815 aaKnown RBP13.47□□□□□ -0.25
HNRNPC-221ENST00000555883 INCA1Q0VD86 236 aa13.47□□□□□ -0.25
HNRNPC-221ENST00000555883 SRSF5Q13243 272 aaKnown RBP13.47□□□□□ -0.25
HNRNPC-221ENST00000555883 LPAL2Q16609 132 aa13.47□□□□□ -0.25
HNRNPC-221ENST00000555883 GAB4Q2WGN9 574 aa13.47□□□□□ -0.25
HNRNPC-221ENST00000555883 HSF5Q4G112 596 aaPredicted RBP13.47□□□□□ -0.25
HNRNPC-221ENST00000555883 C1orf220Q5T0J3 134 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms