RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 MAD2L2Q9UI95 211 aa6.24□□□□□ -1.41
NEK9-207ENST00000555763 MMP17Q9ULZ9 603 aa6.24□□□□□ -1.41
NEK9-207ENST00000555763 TBX20Q9UMR3 447 aa6.24□□□□□ -1.41
NEK9-207ENST00000555763 BTBD3Q9Y2F9 522 aa6.24□□□□□ -1.41
NEK9-207ENST00000555763 IPPQ9Y573 584 aa6.24□□□□□ -1.41
NEK9-207ENST00000555763 PCDHGB2Q9Y5G2 931 aa6.24□□□□□ -1.41
NEK9-207ENST00000555763 BACE2Q9Y5Z0 518 aa6.24□□□□□ -1.41
NEK9-207ENST00000555763 TCHHQ07283 1943 aa6.24□□□□□ -1.41
NEK9-207ENST00000555763 ZNF106Q9H2Y7 1883 aaKnown RBP6.24□□□□□ -1.41
NEK9-207ENST00000555763 ZNF469Q96JG9 3925 aaPredicted RBP6.23□□□□□ -1.41
NEK9-207ENST00000555763 FAM221AA4D161 298 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 B2RBV5 119 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 K7ENP7 123 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 MMP20O60882 483 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 TADA2AO75478 443 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 SASH3O75995 380 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 MYL4P12829 197 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 ATF2P15336 505 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 FGFR3P22607 806 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 MSX1P28360 303 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 HOXA11P31270 313 aaPredicted RBP6.23□□□□□ -1.41
NEK9-207ENST00000555763 SREBF1P36956 1147 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 CTSOP43234 321 aaPredicted RBP6.23□□□□□ -1.41
NEK9-207ENST00000555763 ZNF165P49910 485 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 GALK1P51570 392 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 CLDN6P56747 220 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 CDC42EP1Q00587 391 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 RPL6Q02878 288 aaKnown RBP6.23□□□□□ -1.41
NEK9-207ENST00000555763 ELAVL2Q12926 359 aaKnown RBP6.23□□□□□ -1.41
NEK9-207ENST00000555763 RUNX3Q13761 415 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 SLC8B1Q6J4K2 584 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 SWSAP1Q6NVH7 229 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 MIS18BP1Q6P0N0 1132 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 INO80CQ6PI98 192 aaPredicted RBP6.23□□□□□ -1.41
NEK9-207ENST00000555763 ENAHQ8N8S7 591 aaPredicted RBP6.23□□□□□ -1.41
NEK9-207ENST00000555763 ZNF461Q8TAF7 563 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 USP33Q8TEY7 942 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 CUL5Q93034 780 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 FAM167AQ96KS9 214 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 P2RY13Q9BPV8 354 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 MXRA8Q9BRK3 442 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 IL21RQ9HBE5 538 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 AGO4Q9HCK5 861 aaKnown RBP6.23□□□□□ -1.41
NEK9-207ENST00000555763 TM7SF3Q9NS93 570 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 CEP72Q9P209 647 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 SUSD2Q9UGT4 822 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 TPCN1Q9ULQ1 816 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 PLAAQ9Y263 795 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 PCDHB5Q9Y5E4 795 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 RTTNQ86VV8 2226 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 SHANK1Q9Y566 2161 aa6.23□□□□□ -1.41
NEK9-207ENST00000555763 A0A1B0GTH6 734 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 PRRG1O14668 218 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 IPO8O15397 1037 aaKnown RBP6.22□□□□□ -1.41
NEK9-207ENST00000555763 PRC1O43663 620 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 CILPO75339 1184 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 RECQL4O94761 1208 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 ALDH1A2O94788 518 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 SEC24AO95486 1093 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 CER1O95813 267 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 JUPP14923 745 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 U2AF2P26368 475 aaKnown RBP eCLIP6.22□□□□□ -1.41
NEK9-207ENST00000555763 KIF5BP33176 963 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 NT5C2P49902 561 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 CLCQ05315 142 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 SSRP1Q08945 709 aaKnown RBP6.22□□□□□ -1.41
NEK9-207ENST00000555763 TARDBPQ13148 414 aaKnown RBP eCLIP6.22□□□□□ -1.41
NEK9-207ENST00000555763 BYSLQ13895 437 aaKnown RBP6.22□□□□□ -1.41
NEK9-207ENST00000555763 C21orf62-AS1Q17RA5 79 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 SPRED3Q2MJR0 410 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 CCDC178Q5BJE1 867 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 IQCEQ6IPM2 695 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 GK5Q6ZS86 529 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 MFSD6Q6ZSS7 791 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 REC114Q7Z4M0 266 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 IQCA1Q86XH1 822 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 REXO1Q8N1G1 1221 aaKnown RBP6.22□□□□□ -1.41
NEK9-207ENST00000555763 ELMOD1Q8N336 334 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 ESR2Q92731 530 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 NAF1Q96HR8 494 aaKnown RBP6.22□□□□□ -1.41
NEK9-207ENST00000555763 CCDC136Q96JN2 1154 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 TBC1D32Q96NH3 1257 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 PNMA5Q96PV4 448 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 FAM124BQ9H5Z6 455 aaPredicted RBP6.22□□□□□ -1.41
NEK9-207ENST00000555763 IFT122Q9HBG6 1241 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 BRMS1Q9HCU9 246 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 GPRC5CQ9NQ84 441 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 ZMYM5Q9UJ78 669 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 ATP8A1Q9Y2Q0 1164 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 GIT1Q9Y2X7 761 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 PCDHGA1Q9Y5H4 931 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 PHLPP2Q6ZVD8 1323 aa6.22□□□□□ -1.41
NEK9-207ENST00000555763 TDRD6O60522 2096 aaKnown RBP6.21□□□□□ -1.41
NEK9-207ENST00000555763 ARHGEF17Q96PE2 2063 aaPredicted RBP6.21□□□□□ -1.41
NEK9-207ENST00000555763 DCHS2Q6V1P9 2916 aa6.21□□□□□ -1.42
NEK9-207ENST00000555763 IGKV6-21A0A0C4DH24 114 aa6.21□□□□□ -1.42
NEK9-207ENST00000555763 ANO9A1A5B4 782 aa6.21□□□□□ -1.42
NEK9-207ENST00000555763 METTL12A8MUP2 240 aa6.21□□□□□ -1.42
NEK9-207ENST00000555763 DDX39AO00148 427 aaKnown RBP6.21□□□□□ -1.42
NEK9-207ENST00000555763 DHX15O43143 795 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms