RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 C16orf70Q9BSU1 422 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 FTOQ9C0B1 505 aaKnown RBP eCLIP3.69□□□□□ -1.82
SLIRP-202ENST00000553981 DCTPP1Q9H773 170 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 SPC25Q9HBM1 224 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 ECHDC1Q9NTX5 307 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 FBXO40Q9UH90 709 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 SH3BP1Q9Y3L3 701 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 NEDD4P46934 1319 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 PTPDC1A2A3K4 754 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 H3BNC9 293 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 SCDO00767 359 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 PDPK1O15530 556 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 BAIAP3O94812 1187 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 PEX11BO96011 259 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 F2P00734 622 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 FGAP02671 866 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 PFKMP08237 780 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 TSPY3P0CV98 308 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 TSPY8P0CW00 308 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 TXNP10599 105 aaKnown RBP3.68□□□□□ -1.82
SLIRP-202ENST00000553981 RFC2P35250 354 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 TDO2P48775 406 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 HAND2P61296 217 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 GABREP78334 506 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 ZNF543Q08ER8 600 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 MGAT3Q09327 533 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 ADAM15Q13444 863 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 USH1GQ495M9 461 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 PLEKHG4Q58EX7 1191 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 CHST3Q7LGC8 479 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 RPAINQ86UA6 219 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 ZC3H7AQ8IWR0 971 aaKnown RBP3.68□□□□□ -1.82
SLIRP-202ENST00000553981 ULK2Q8IYT8 1036 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 CISD2Q8N5K1 135 aaKnown RBP3.68□□□□□ -1.82
SLIRP-202ENST00000553981 CHURC1Q8WUH1 139 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 RABGGTAQ92696 567 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 TOP1MTQ969P6 601 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 MSLNLQ96KJ4 702 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 EXOC2Q96KP1 924 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 GBP4Q96PP9 640 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 UIMC1Q96RL1 719 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 TGS1Q96RS0 853 aaKnown RBP3.68□□□□□ -1.82
SLIRP-202ENST00000553981 RAD9AQ99638 391 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 PRRX2Q99811 253 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 TRIM55Q9BYV6 548 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 LRRCC1Q9C099 1032 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 RNPEPQ9H4A4 650 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 PFDN2Q9UHV9 154 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 ANAPC4Q9UJX5 808 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 SYNPO2Q9UMS6 1093 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 STX8Q9UNK0 236 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 CTDP1Q9Y5B0 961 aaPredicted RBP3.68□□□□□ -1.82
SLIRP-202ENST00000553981 USP34Q70CQ2 3546 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 LOXHD1Q8IVV2 1947 aa3.68□□□□□ -1.82
SLIRP-202ENST00000553981 RALGAPA2Q2PPJ7 1873 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 ABHD14A-ACY1A0A1B0GW23 586 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 A0A1W2PRX2 142 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 TSPY2A6NKD2 308 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 GOLGA6L22H0YM25 854 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 ADAMTS3O15072 1205 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 DCXO43602 365 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 CYTH3O43739 400 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 ORC4O43929 436 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 ZEB2O60315 1214 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 RAMP2O60895 175 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 PPFIA2O75334 1257 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 MAFO75444 373 aaPredicted RBP3.67□□□□□ -1.82
SLIRP-202ENST00000553981 CHRNA1P02708 482 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 APPP05067 770 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 SUPT20HL2P0C7V6 817 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 HSPD1P10809 573 aaKnown RBP3.67□□□□□ -1.82
SLIRP-202ENST00000553981 CPT1AP50416 773 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 MRPS9P82933 396 aaKnown RBP3.67□□□□□ -1.82
SLIRP-202ENST00000553981 SLC25A3Q00325 362 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 IKQ13123 557 aaPredicted RBP3.67□□□□□ -1.82
SLIRP-202ENST00000553981 GPM6BQ13491 265 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 ACAP1Q15027 740 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 PPP2R5BQ15173 497 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 KIAA0753Q2KHM9 967 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 AAK1Q2M2I8 961 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 CCDC96Q2M329 555 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 QRICH1Q2TAL8 776 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 MTERF2Q49AM1 385 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 HSP90AB4PQ58FF6 505 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 HERC4Q5GLZ8 1057 aaPredicted RBP3.67□□□□□ -1.82
SLIRP-202ENST00000553981 ASCL5Q7RTU5 278 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 SERINC5Q86VE9 423 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 ADGRF4Q8IZF3 695 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 MYOCDQ8IZQ8 938 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 HIPK4Q8NE63 616 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 CAGE1Q8TC20 777 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 AFAP1L1Q8TED9 768 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 ZNF689Q96CS4 500 aaPredicted RBP3.67□□□□□ -1.82
SLIRP-202ENST00000553981 PABPC5Q96DU9 382 aaKnown RBP3.67□□□□□ -1.82
SLIRP-202ENST00000553981 MRPL38Q96DV4 380 aaKnown RBP3.67□□□□□ -1.82
SLIRP-202ENST00000553981 MTMR8Q96EF0 704 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 TTPALQ9BTX7 342 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.67□□□□□ -1.82
SLIRP-202ENST00000553981 NAPBQ9H115 298 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 MTIF3Q9H2K0 278 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms