RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ELSPBP1Q96BH3 223 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 ZSWIM3Q96MP5 696 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 SLITRK1Q96PX8 696 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 KXD1Q9BQD3 176 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 DUSP16Q9BY84 665 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 VPS16Q9H269 839 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 FBXO44Q9H4M3 255 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 TASP1Q9H6P5 420 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 ZFP14Q9HCL3 533 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 IL37Q9NZH6 218 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 TSPAN16Q9UKR8 245 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 DAAM1Q9Y4D1 1078 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 ZNF318Q5VUA4 2279 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 LRRC10BA6NIK2 292 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 BECN2A8MW95 431 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 HHLA1C9JL84 531 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 SETSIPP0DME0 302 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 SRFP11831 508 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 ATP1A3P13637 1013 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 KRT5P13647 590 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 CDK11BP21127 795 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 YWHAQP27348 245 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 SLC8A3P57103 927 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 ZXDAP98168 799 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 APBA1Q02410 837 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 BST2Q10589 180 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 IQCB1Q15051 598 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 MEA1Q16626 185 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 DPY19L2P1Q6NXN4 242 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 APTXQ7Z2E3 356 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 GPRIN1Q7Z2K8 1008 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 MON1AQ86VX9 555 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 TTC30AQ86WT1 665 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 ANKRD52Q8NB46 1076 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 RSAD2Q8WXG1 361 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 EDAQ92838 391 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 FBXO32Q969P5 355 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 LSM14BQ9BX40 385 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 PLCB1Q9NQ66 1216 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 OBP2AQ9NY56 170 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 TRPM5Q9NZQ8 1165 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 HESX1Q9UBX0 185 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 AJAP1Q9UKB5 411 aaPredicted RBP12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 KIAA1549LQ6ZVL6 1849 aa12.38□□□□□ -0.43
TRAFD1-209ENST00000552896 TRAV19A0A0A6YYK7 116 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 RNF225M0QZC1 329 aaPredicted RBP12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 XPO1O14980 1071 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 PRAMEF12O95522 483 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 UCHL3P15374 230 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 BRD2P25440 801 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 AVPR1AP37288 418 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 TUBP50607 506 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 SIGLEC14Q08ET2 396 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 KCNMA1Q12791 1236 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 IFRD2Q12894 506 aaPredicted RBP12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 TAF10Q12962 218 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 ZNF268Q14587 947 aaPredicted RBP12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 ARHGAP44Q17R89 818 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 PKDCCQ504Y2 493 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 KLHDC7AQ5VTJ3 777 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 LCLAT1Q6UWP7 414 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 CMTM8Q8IZV2 173 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 SLC44A3Q8N4M1 653 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 MAB21L3Q8N8X9 362 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 SCAMP5Q8TAC9 235 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 DEPDC1BQ8WUY9 529 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 TFAP2BQ92481 460 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 ERGIC2Q96RQ1 377 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 NAA15Q9BXJ9 866 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 UBXN6Q9BZV1 441 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 GANQ9H2C0 597 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 CBX8Q9HC52 389 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 SLC2A4RGQ9NR83 387 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 DNAJC12Q9UKB3 198 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 SIK3Q9Y2K2 1263 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 FHOD1Q9Y613 1164 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 ZDBF2Q9HCK1 2354 aa12.37□□□□□ -0.43
TRAFD1-209ENST00000552896 C2orf78A6NCI8 922 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 ZNF840PA6NDX5 716 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 M0QYV0 167 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 MED7O43513 233 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 OLFM2O95897 454 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 OAS1P00973 400 aaKnown RBP12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 ZDHHC11BP0C7U3 371 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 GNA15P30679 374 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 PLA2G4AP47712 749 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 KIF11P52732 1056 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 TPM4P67936 248 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 USP4Q13107 963 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 CNGA2Q16280 664 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 RAB41Q5JT25 222 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 SNX30Q5VWJ9 437 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 TXNDC8Q6A555 127 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 TANGO2Q6ICL3 276 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 VITQ6UXI7 678 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 CCDC186Q7Z3E2 898 aa12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 ARID3BQ8IVW6 561 aaPredicted RBP12.36□□□□□ -0.43
TRAFD1-209ENST00000552896 ZSWIM1Q9BR11 485 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms