RNA–Protein interactions for RNA: ENST00000552487.1

ATF1-204, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-204ENST00000552487 SCN1AP35498 2009 aa11.77□□□□□ -0.53
ATF1-204ENST00000552487 CFAP54Q96N23 3096 aa11.77□□□□□ -0.53
ATF1-204ENST00000552487 TCHHQ07283 1943 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 CCDC163A0A0D9SF12 145 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 ZNF840PA6NDX5 716 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 LEFTY2O00292 366 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 IKBKBO14920 756 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 AXIN1O15169 862 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 ACTN4O43707 911 aaKnown RBP11.76□□□□□ -0.53
ATF1-204ENST00000552487 RHOBTB1O94844 696 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 CST3P01034 146 aaPredicted RBP11.76□□□□□ -0.53
ATF1-204ENST00000552487 EGFP01133 1207 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 APODP05090 189 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 FAM200BP0CF97 657 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 EPB41P11171 864 aaKnown RBP11.76□□□□□ -0.53
ATF1-204ENST00000552487 NR2F2P24468 414 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 GBP1P32455 592 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 HOXD13P35453 343 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 CASP4P49662 377 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 GALK1P51570 392 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 VAMP7P51809 220 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 USP39Q53GS9 565 aaKnown RBP11.76□□□□□ -0.53
ATF1-204ENST00000552487 WDR44Q5JSH3 913 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 FSTL4Q6MZW2 842 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 FAM35AQ86V20 835 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 FAM186BQ8IYM0 893 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 ZNF687Q8N1G0 1237 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 TTC39CQ8N584 583 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 PARD3BQ8TEW8 1205 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 GAB3Q8WWW8 586 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 TSG101Q99816 390 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 TTLL2Q9BWV7 592 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 GTPBP4Q9BZE4 634 aaKnown RBP11.76□□□□□ -0.53
ATF1-204ENST00000552487 MMRN2Q9H8L6 949 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 TLR8Q9NR97 1041 aaKnown RBP11.76□□□□□ -0.53
ATF1-204ENST00000552487 COMMD8Q9NX08 183 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 BCCIPQ9P287 314 aaKnown RBP eCLIP11.76□□□□□ -0.53
ATF1-204ENST00000552487 CFAP97Q9P2B7 532 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 WDR87Q6ZQQ6 2873 aa11.76□□□□□ -0.53
ATF1-204ENST00000552487 ZNF292O60281 2723 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 TSC2P49815 1807 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 SHISA7A6NL88 538 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 LRRIQ3A6PVS8 624 aaPredicted RBP11.75□□□□□ -0.53
ATF1-204ENST00000552487 TADA3O75528 432 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 AKAP3O75969 853 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 SMC2O95347 1197 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 TCF3P15923 654 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 PSMC2P35998 433 aaKnown RBP11.75□□□□□ -0.53
ATF1-204ENST00000552487 RAP1GAPP47736 663 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 PXNP49023 591 aaPredicted RBP11.75□□□□□ -0.53
ATF1-204ENST00000552487 DGKEP52429 567 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 SEC13P55735 322 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 SLC7A9P82251 487 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 EHHADHQ08426 723 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 STK4Q13043 487 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 STIM1Q13586 685 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 GAS6Q14393 721 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 DMC1Q14565 340 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 CCDC142Q17RM4 750 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 EML3Q32P44 896 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 TRMT11Q7Z4G4 463 aaKnown RBP11.75□□□□□ -0.53
ATF1-204ENST00000552487 FILIP1Q7Z7B0 1213 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 ACOT1Q86TX2 421 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 UNC93AQ86WB7 457 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 OTUB2Q96DC9 234 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 LOXL4Q96JB6 756 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 SPACA7Q96KW9 195 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 HHIPQ96QV1 700 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 DPEP3Q9H4B8 488 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 VRTNQ9H8Y1 702 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 SEMA4GQ9NTN9 838 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 TICRRQ7Z2Z1 1910 aa11.75□□□□□ -0.53
ATF1-204ENST00000552487 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.74□□□□□ -0.53
ATF1-204ENST00000552487 K7ESF4 209 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 CLDN5O00501 218 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 CETN3O15182 167 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 HRO43593 1189 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 ADH5P11766 374 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 TDGF1P13385 188 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 ADORA2BP29275 332 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 SLC5A3P53794 718 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 CDH8P55286 799 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 PKP1Q13835 747 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 BYSLQ13895 437 aaKnown RBP11.74□□□□□ -0.53
ATF1-204ENST00000552487 CSRP2Q16527 193 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 ANO4Q32M45 955 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 C2orf27AQ580R0 203 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 SDE2Q6IQ49 451 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 PRR23CQ6ZRP0 262 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 SYT13Q7L8C5 426 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 LIMS2Q7Z4I7 341 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 FAM160A2Q8N612 972 aaPredicted RBP11.74□□□□□ -0.53
ATF1-204ENST00000552487 KIAA0895Q8NCT3 520 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 JAKMIP2Q96AA8 810 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 CHFRQ96EP1 664 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 SLC22A12Q96S37 553 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 CDK5RAP1Q96SZ6 601 aaKnown RBP11.74□□□□□ -0.53
ATF1-204ENST00000552487 PNKPQ96T60 521 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 NT5C1AQ9BXI3 368 aa11.74□□□□□ -0.53
ATF1-204ENST00000552487 B3GNT5Q9BYG0 378 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms