RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 EFCAB6Q5THR3 1501 aa7.5□□□□□ -1.21
CHPT1-209ENST00000552329 HFM1A2PYH4 1435 aa7.5□□□□□ -1.21
CHPT1-209ENST00000552329 ZNF142P52746 1687 aaPredicted RBP7.5□□□□□ -1.21
CHPT1-209ENST00000552329 SPATA31D1Q6ZQQ2 1576 aa7.5□□□□□ -1.21
CHPT1-209ENST00000552329 IQGAP3Q86VI3 1631 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 EBLN1P0CF75 366 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 GRIA3P42263 894 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 PTPRRQ15256 657 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 ZIK1Q3SY52 487 aaPredicted RBP7.49□□□□□ -1.21
CHPT1-209ENST00000552329 ICE2Q659A1 982 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 MAVSQ7Z434 540 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 LRTOMTQ8WZ04 291 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 SLC9A6Q92581 669 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 ANKS1AQ92625 1134 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 PUS7Q96PZ0 661 aaKnown RBP7.49□□□□□ -1.21
CHPT1-209ENST00000552329 CRAMP1Q96RY5 1269 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 PTDSS2Q9BVG9 487 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 R3HDMLQ9H3Y0 253 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 SMURF2Q9HAU4 748 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 CPNE5Q9HCH3 593 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 SLC52A1Q9NWF4 448 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 NDRG4Q9ULP0 352 aaKnown RBP7.49□□□□□ -1.21
CHPT1-209ENST00000552329 SSX2IPQ9Y2D8 614 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 INSL6Q9Y581 213 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 ARHGAP31Q2M1Z3 1444 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 SETD5Q9C0A6 1442 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 VWDEQ8N2E2 1590 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 SPATA31A6Q5VVP1 1343 aa7.49□□□□□ -1.21
CHPT1-209ENST00000552329 ZNF335Q9H4Z2 1342 aaPredicted RBP7.49□□□□□ -1.21
CHPT1-209ENST00000552329 LMTK2Q8IWU2 1503 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 MYO1FO00160 1098 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 SYNMO15061 1565 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 POLR1AO95602 1720 aaPredicted RBP7.48□□□□□ -1.21
CHPT1-209ENST00000552329 THP07101 528 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 ZFXP17010 805 aaPredicted RBP7.48□□□□□ -1.21
CHPT1-209ENST00000552329 EN2P19622 333 aaPredicted RBP7.48□□□□□ -1.21
CHPT1-209ENST00000552329 PEX2P28328 305 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 VIPR2P41587 438 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 GBX1Q14549 363 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 PLA1AQ53H76 456 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 DEPDC1Q5TB30 811 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 DCAF12L1Q5VU92 463 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 DARS2Q6PI48 645 aaKnown RBP7.48□□□□□ -1.21
CHPT1-209ENST00000552329 UBR1Q8IWV7 1749 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 FAM109AQ8N4B1 249 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 RFKQ969G6 155 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 MOGAT1Q96PD6 335 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 CXorf36Q9H7Y0 433 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 SHOC2Q9UQ13 582 aa7.48□□□□□ -1.21
CHPT1-209ENST00000552329 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.48□□□□□ -1.21
CHPT1-209ENST00000552329 RAB3GAP2Q9H2M9 1393 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 A0A087WWL8 130 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 ADORA2AP29274 412 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 LIPAP38571 399 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 CACNB3P54284 484 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 MYO1EQ12965 1108 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 RAB32Q13637 225 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 NBPF8Q3BBV2 869 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 TREML2Q5T2D2 321 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 FBXO42Q6P3S6 717 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 ZDHHC24Q6UX98 284 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 AMIGO2Q86SJ2 522 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 RASAL3Q86YV0 1011 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 BOLLQ8N9W6 283 aaKnown RBP7.47□□□□□ -1.21
CHPT1-209ENST00000552329 OR56A3Q8NH54 315 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 TMEM171Q8WVE6 324 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 ATG4AQ8WYN0 398 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 STK31Q9BXU1 1019 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 PRDM11Q9NQV5 511 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 EHD3Q9NZN3 535 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 OGDHLQ9ULD0 1010 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 FAM50BQ9Y247 325 aa7.47□□□□□ -1.21
CHPT1-209ENST00000552329 NPHP4O75161 1426 aaPredicted RBP7.46□□□□□ -1.21
CHPT1-209ENST00000552329 NOS1P29475 1434 aa7.46□□□□□ -1.21
CHPT1-209ENST00000552329 WDR27A2RRH5 827 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 ORC4O43929 436 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 URI1O94763 535 aaPredicted RBP7.46□□□□□ -1.22
CHPT1-209ENST00000552329 ZBED1O96006 694 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 FESP07332 822 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 ITGA8P53708 1063 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 PRKAG1P54619 331 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 FMO1Q01740 532 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 E2F2Q14209 437 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 CNGA2Q16280 664 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 CHST15Q7LFX5 561 aaPredicted RBP7.46□□□□□ -1.22
CHPT1-209ENST00000552329 RD3Q7Z3Z2 195 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 ADGRG3Q86Y34 549 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 GLG1Q92896 1179 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 R3HDM4Q96D70 268 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 PBKQ96KB5 322 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 HAPLN3Q96S86 360 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 MESP1Q9BRJ9 268 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 RPRD2Q5VT52 1461 aaKnown RBP7.46□□□□□ -1.22
CHPT1-209ENST00000552329 SPHKAPQ2M3C7 1700 aa7.46□□□□□ -1.22
CHPT1-209ENST00000552329 PTPRTO14522 1441 aa7.45□□□□□ -1.22
CHPT1-209ENST00000552329 PLA2R1Q13018 1463 aa7.45□□□□□ -1.22
CHPT1-209ENST00000552329 GOLIM4O00461 696 aa7.45□□□□□ -1.22
CHPT1-209ENST00000552329 MGEA5O60502 916 aa7.45□□□□□ -1.22
CHPT1-209ENST00000552329 RASSF9O75901 435 aa7.45□□□□□ -1.22
CHPT1-209ENST00000552329 VNN1O95497 513 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms