RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 SLC38A8A6NNN8 435 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 PIK3R2O00459 728 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 ZNF263O14978 683 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 TRIM66O15016 1216 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 BMP1P13497 986 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 RPL34P49207 117 aaKnown RBP14.25□□□□□ -0.13
ERBB3-215ENST00000550828 TUFMP49411 452 aaKnown RBP14.25□□□□□ -0.13
ERBB3-215ENST00000550828 PGFP49763 221 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 SLC5A3P53794 718 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 PTP4A2Q12974 167 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 PDCLQ13371 301 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 MTF1Q14872 753 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 C2CD6Q53TS8 623 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 RAB41Q5JT25 222 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 PPM1LQ5SGD2 360 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 LIN9Q5TKA1 542 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 CCDC149Q6ZUS6 474 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 TMC8Q8IU68 726 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 FMNL3Q8IVF7 1028 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 CPA5Q8WXQ8 436 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 CASP10Q92851 521 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 PPP2R3CQ969Q6 453 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 SPATA17Q96L03 361 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 PPP1R9BQ96SB3 815 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 APOL5Q9BWW9 433 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 SLC4A5Q9BY07 1137 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 HCFC1R1Q9NWW0 138 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 IL37Q9NZH6 218 aa14.25□□□□□ -0.13
ERBB3-215ENST00000550828 NUP210Q8TEM1 1887 aaPredicted RBP14.25□□□□□ -0.13
ERBB3-215ENST00000550828 XIRP2A4UGR9 3374 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 SSU72P8A0A1W2PR75 194 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 SOWAHDA6NJG2 315 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 TADA3O75528 432 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 LSM8O95777 96 aaKnown RBP14.24□□□□□ -0.13
ERBB3-215ENST00000550828 ERBB2P04626 1255 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 CCDC172P0C7W6 258 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 TNFAIP3P21580 790 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 HOXA9P31269 272 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 GSDMDP57764 484 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 RPL10AP62906 217 aaKnown RBP14.24□□□□□ -0.13
ERBB3-215ENST00000550828 CENPCQ03188 943 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 RARS2Q5T160 578 aaKnown RBP14.24□□□□□ -0.13
ERBB3-215ENST00000550828 ANKRD54Q6NXT1 300 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 RAD9BQ6WBX8 426 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 TRIM72Q6ZMU5 477 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 HS6ST3Q8IZP7 471 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 CLEC4CQ8WTT0 213 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 KCTD13Q8WZ19 329 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 NDRG1Q92597 394 aaKnown RBP14.24□□□□□ -0.13
ERBB3-215ENST00000550828 PIWIL1Q96J94 861 aaKnown RBP14.24□□□□□ -0.13
ERBB3-215ENST00000550828 MSLNLQ96KJ4 702 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 TTLL2Q9BWV7 592 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 UBXN6Q9BZV1 441 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 NHEJ1Q9H9Q4 299 aaPredicted RBP14.24□□□□□ -0.13
ERBB3-215ENST00000550828 IL21Q9HBE4 155 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 PNPLA8Q9NP80 782 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 SPTLC3Q9NUV7 552 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 SEPT11Q9NVA2 429 aaKnown RBP14.24□□□□□ -0.13
ERBB3-215ENST00000550828 CLDND1Q9NY35 253 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 ADAMTS1Q9UHI8 967 aa14.24□□□□□ -0.13
ERBB3-215ENST00000550828 BZW2Q9Y6E2 419 aaKnown RBP14.24□□□□□ -0.13
ERBB3-215ENST00000550828 NCANO14594 1321 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 E5RJQ4 531 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 POU2F2P09086 479 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 ALDH1A3P47895 512 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 KIF11P52732 1056 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 NTHL1P78549 312 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 CCZ1BP86790 482 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 CCZ1P86791 482 aaPredicted RBP14.23□□□□□ -0.13
ERBB3-215ENST00000550828 GFPT1Q06210 699 aaPredicted RBP14.23□□□□□ -0.13
ERBB3-215ENST00000550828 ADIGQ0VDE8 80 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 PLD1Q13393 1074 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 CYP4A22Q5TCH4 519 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 TMC5Q6UXY8 1006 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 MON1BQ7L1V2 547 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 DNAJB7Q7Z6W7 309 aaPredicted RBP14.23□□□□□ -0.13
ERBB3-215ENST00000550828 TMEM150AQ86TG1 271 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 TMEM35BQ8NCS4 154 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 CMASQ8NFW8 434 aaPredicted RBP14.23□□□□□ -0.13
ERBB3-215ENST00000550828 STK32AQ8WU08 396 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 PSMG2Q969U7 264 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 PABPC5Q96DU9 382 aaKnown RBP14.23□□□□□ -0.13
ERBB3-215ENST00000550828 PRKD2Q9BZL6 878 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 ULBP1Q9BZM6 244 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 S1PR5Q9H228 398 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 KCNF1Q9H3M0 494 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 SFXN1Q9H9B4 322 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 DZANK1Q9NVP4 752 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 ZNHIT6Q9NWK9 470 aaKnown RBP14.23□□□□□ -0.13
ERBB3-215ENST00000550828 ZDHHC7Q9NXF8 308 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 REXO2Q9Y3B8 237 aaKnown RBP14.23□□□□□ -0.13
ERBB3-215ENST00000550828 USP3Q9Y6I4 520 aa14.23□□□□□ -0.13
ERBB3-215ENST00000550828 CCDC195A0A1B0GUA6 201 aa14.22□□□□□ -0.13
ERBB3-215ENST00000550828 FAM92AA1XBS5 289 aa14.22□□□□□ -0.13
ERBB3-215ENST00000550828 TMCO5BA8MYB1 307 aa14.22□□□□□ -0.13
ERBB3-215ENST00000550828 PAPSS1O43252 624 aaPredicted RBP14.22□□□□□ -0.13
ERBB3-215ENST00000550828 MOSPD3O75425 235 aa14.22□□□□□ -0.13
ERBB3-215ENST00000550828 LRG1P02750 347 aa14.22□□□□□ -0.13
ERBB3-215ENST00000550828 HNRNPA1P09651 372 aaKnown RBP eCLIP14.22□□□□□ -0.13
ERBB3-215ENST00000550828 LCP1P13796 627 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms