RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 WASH6PQ9NQA3 447 aa6.55□□□□□ -1.36
HCFC2-204ENST00000550335 RNF181Q9P0P0 153 aa6.55□□□□□ -1.36
HCFC2-204ENST00000550335 CTTNBP2NLQ9P2B4 639 aa6.55□□□□□ -1.36
HCFC2-204ENST00000550335 DAPP1Q9UN19 280 aa6.55□□□□□ -1.36
HCFC2-204ENST00000550335 ZFR2Q9UPR6 939 aaKnown RBP6.55□□□□□ -1.36
HCFC2-204ENST00000550335 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.55□□□□□ -1.36
HCFC2-204ENST00000550335 E7EVH7 732 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 CD3EAPO15446 510 aaKnown RBP6.54□□□□□ -1.36
HCFC2-204ENST00000550335 PRKCBP05771 671 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 HLA-DOAP06340 250 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 FAM163BP0C2L3 166 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 CD6P30203 668 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 RBM5P52756 815 aaKnown RBP eCLIP6.54□□□□□ -1.36
HCFC2-204ENST00000550335 MAPK7Q13164 816 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 ATP1A4Q13733 1029 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 HYIQ5T013 277 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 FAM102AQ5T9C2 384 aaPredicted RBP6.54□□□□□ -1.36
HCFC2-204ENST00000550335 VPS53Q5VIR6 699 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 AGAP9Q5VTM2 703 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 ABLIM2Q6H8Q1 611 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 SYNE3Q6ZMZ3 975 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 RAB11FIP2Q7L804 512 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 SYT13Q7L8C5 426 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 CLNKQ7Z7G1 428 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 HERC6Q8IVU3 1022 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 ANKRD35Q8N283 1001 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 WDR60Q8WVS4 1066 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 RRP36Q96EU6 259 aaKnown RBP6.54□□□□□ -1.36
HCFC2-204ENST00000550335 NEUROD6Q96NK8 337 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 MNTQ99583 582 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 GPR87Q9BY21 358 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 TRPM5Q9NZQ8 1165 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 RGS17Q9UGC6 210 aaPredicted RBP6.54□□□□□ -1.36
HCFC2-204ENST00000550335 FBXO2Q9UK22 296 aaPredicted RBP6.54□□□□□ -1.36
HCFC2-204ENST00000550335 SLC13A4Q9UKG4 626 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 ARHGAP26Q9UNA1 814 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 SCINQ9Y6U3 715 aa6.54□□□□□ -1.36
HCFC2-204ENST00000550335 LIFRP42702 1097 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 NPTX2P47972 431 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 GATMP50440 423 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 EPHB4P54760 987 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 UBE3AQ05086 875 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 CCNIQ14094 377 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 PKN1Q16512 942 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 RBM20Q5T481 1227 aaKnown RBP6.53□□□□□ -1.36
HCFC2-204ENST00000550335 METRNLQ641Q3 311 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 TCTN3Q6NUS6 607 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 MAPKAPK5Q8IW41 473 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 TMEM57Q8N5G2 664 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 HMGB4Q8WW32 186 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 THAP4Q8WY91 577 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 HTRA1Q92743 480 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 RNF31Q96EP0 1072 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 DDX23Q9BUQ8 820 aaKnown RBP6.53□□□□□ -1.36
HCFC2-204ENST00000550335 TEX101Q9BY14 249 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 TRIM5Q9C035 493 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 MEGF9Q9H1U4 602 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 VPS16Q9H269 839 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 UNC45AQ9H3U1 944 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 KCND3Q9UK17 655 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 SORCS3Q9UPU3 1222 aa6.53□□□□□ -1.36
HCFC2-204ENST00000550335 RRP7AQ9Y3A4 280 aaKnown RBP6.53□□□□□ -1.36
HCFC2-204ENST00000550335 FER1L4A9Z1Z3 1794 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 DCAF1Q9Y4B6 1507 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 PRSS47A8MTI9 375 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 GOLGA6L6A8MZA4 724 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 KIF28PB7ZC32 967 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 HOXC11O43248 304 aaPredicted RBP6.52□□□□□ -1.37
HCFC2-204ENST00000550335 TRIAP1O43715 76 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 RPS6KA4O75676 772 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 RAD17O75943 681 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 TSPAN15O95858 294 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 HSP90AA1P07900 732 aaKnown RBP6.52□□□□□ -1.37
HCFC2-204ENST00000550335 UQCRC1P31930 480 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 CNR2P34972 360 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 MTHFSP49914 203 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 ANXA11P50995 505 aaKnown RBP6.52□□□□□ -1.37
HCFC2-204ENST00000550335 OCA2Q04671 838 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 TUBB3Q13509 450 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 DYRK1AQ13627 763 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 LY6KQ17RY6 165 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 PDCD4Q53EL6 469 aaKnown RBP6.52□□□□□ -1.37
HCFC2-204ENST00000550335 DCAF17Q5H9S7 520 aaPredicted RBP6.52□□□□□ -1.37
HCFC2-204ENST00000550335 METTL24Q5JXM2 366 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 NFRKBQ6P4R8 1299 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 Q8N3U1 123 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 TCP11L2Q8N4U5 519 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 UCMAQ8WVF2 138 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 SNX19Q92543 992 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 ZNF668Q96K58 619 aaPredicted RBP6.52□□□□□ -1.37
HCFC2-204ENST00000550335 EIF3CQ99613 913 aaKnown RBP6.52□□□□□ -1.37
HCFC2-204ENST00000550335 MSL2Q9HCI7 577 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 FSCN3Q9NQT6 498 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 MAP3K2Q9Y2U5 619 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 NEU2Q9Y3R4 380 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 DUSP10Q9Y6W6 482 aa6.52□□□□□ -1.37
HCFC2-204ENST00000550335 AGPSO00116 658 aa6.51□□□□□ -1.37
HCFC2-204ENST00000550335 FOXS1O43638 330 aa6.51□□□□□ -1.37
HCFC2-204ENST00000550335 TAF5LO75529 589 aa6.51□□□□□ -1.37
HCFC2-204ENST00000550335 SCAF4O95104 1147 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms