RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 CHADO15335 359 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 PRPF4O43172 522 aaKnown RBP eCLIP9.35□□□□□ -0.91
TMEM116-209ENST00000550020 ENDOD1O94919 500 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 SMIM10L2AP0DMW4 78 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 SMIM10L2BP0DMW5 78 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 RBP3P10745 1247 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 CYP2C9P11712 490 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 TCF4P15884 667 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 YBX3P16989 372 aaKnown RBP eCLIP9.35□□□□□ -0.916e-6■□□□□ 10.9
TMEM116-209ENST00000550020 KRT15P19012 456 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 NR2C2P49116 596 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 LIG3P49916 1009 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 CDH6P55285 790 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 DYNLT1P63172 113 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 BST2Q10589 180 aaKnown RBP9.35□□□□□ -0.91
TMEM116-209ENST00000550020 CBLBQ13191 982 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 XRCC4Q13426 336 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 SPARCL1Q14515 664 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 MFSD10Q14728 455 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 TMED2Q15363 201 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 ZBTB6Q15916 424 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 SEPT7Q16181 437 aaKnown RBP9.35□□□□□ -0.91
TMEM116-209ENST00000550020 EFHC1Q5JVL4 640 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 FBXO47Q5MNV8 452 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 MARCH8Q5T0T0 291 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 LGSNQ5TDP6 509 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 SPRYD7Q5W111 196 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 PSTKQ8IV42 348 aaKnown RBP9.35□□□□□ -0.91
TMEM116-209ENST00000550020 ZBED8Q8IZ13 594 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 CRYBG2Q8N1P7 616 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 EMC1Q8N766 993 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 OR6B3Q8NGW1 331 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 UBA3Q8TBC4 463 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 SPATA18Q8TC71 538 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 HSFY1Q96LI6 401 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 TWNKQ96RR1 684 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 FAM118BQ9BPY3 351 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 ZNF670Q9BS34 389 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 KLC2Q9H0B6 622 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.35□□□□□ -0.91
TMEM116-209ENST00000550020 PCSK1NQ9UHG2 260 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 CYTH4Q9UIA0 394 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 USP15Q9Y4E8 981 aaPredicted RBP9.35□□□□□ -0.91
TMEM116-209ENST00000550020 FARP1Q9Y4F1 1045 aaPredicted RBP9.35□□□□□ -0.91
TMEM116-209ENST00000550020 SNX9Q9Y5X1 595 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 SCN4AP35499 1836 aa9.35□□□□□ -0.91
TMEM116-209ENST00000550020 IQANK1A0A1B0GTG1 560 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 DCAF8L1A6NGE4 600 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 A8MXQ7 604 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 E5RJQ4 531 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 E7ESA3 106 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 H7C0C1 242 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 M0QZ92 97 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 DYNC1LI2O43237 492 aaPredicted RBP9.34□□□□□ -0.91
TMEM116-209ENST00000550020 HUS1O60921 280 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 STK10O94804 968 aaKnown RBP9.34□□□□□ -0.91
TMEM116-209ENST00000550020 ZWINTO95229 277 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 KCNE1P15382 129 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 PAX3P23760 479 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 IL1R2P27930 398 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 RPL22P35268 128 aaKnown RBP9.34□□□□□ -0.91
TMEM116-209ENST00000550020 ATP5OP48047 213 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 IFNAR2P48551 515 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 TAF6P49848 677 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 CRYBB1P53674 252 aaPredicted RBP9.34□□□□□ -0.91
TMEM116-209ENST00000550020 BCAR1P56945 870 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 SARNPP82979 210 aaKnown RBP9.34□□□□□ -0.91
TMEM116-209ENST00000550020 MAP2K5Q13163 448 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 CCDC142Q17RM4 750 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 KIZQ2M2Z5 673 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 SMTNL2Q2TAL5 461 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 CCDC38Q502W7 563 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 KCNT1Q5JUK3 1230 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 GJC2Q5T442 439 aaPredicted RBP9.34□□□□□ -0.91
TMEM116-209ENST00000550020 VSTM1Q6UX27 236 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 FAM183BPQ6ZVS7 135 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 PAXIP1Q6ZW49 1069 aaPredicted RBP9.34□□□□□ -0.91
TMEM116-209ENST00000550020 TRABD2AQ86V40 505 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 SRRM1Q8IYB3 904 aaKnown RBP9.34□□□□□ -0.91
TMEM116-209ENST00000550020 LRRC34Q8IZ02 419 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 ANKRD42Q8N9B4 389 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 NAT8LQ8N9F0 302 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 ANKRD52Q8NB46 1076 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 APPL2Q8NEU8 664 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 LRRC39Q96DD0 335 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 RNF157Q96PX1 679 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 PPP1R16BQ96T49 567 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 CYTH2Q99418 400 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 FAM49AQ9H0Q0 323 aaPredicted RBP9.34□□□□□ -0.91
TMEM116-209ENST00000550020 TRABDQ9H4I3 376 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 ACSS3Q9H6R3 686 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 SLC38A7Q9NVC3 462 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 SETD4Q9NVD3 440 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 DNAJC17Q9NVM6 304 aaKnown RBP9.34□□□□□ -0.91
TMEM116-209ENST00000550020 GDAP2Q9NXN4 497 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 SNTG2Q9NY99 539 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 RCOR3Q9P2K3 495 aaPredicted RBP9.34□□□□□ -0.91
TMEM116-209ENST00000550020 HMGXB4Q9UGU5 601 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 XPO7Q9UIA9 1087 aaKnown RBP9.34□□□□□ -0.91
TMEM116-209ENST00000550020 ARL2BPQ9Y2Y0 163 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms