RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 KIAA0586Q9BVV6 1533 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 ZAR1LA6NP61 321 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 ADM5C9JUS6 153 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 F5H697 171 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 PROM1O43490 865 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 SPDEFO95238 335 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 ARP10275 920 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 ATICP31939 592 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 BCAT1P54687 386 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 TIAL1Q01085 375 aaKnown RBP eCLIP4.84□□□□□ -1.63
PTCH1-216ENST00000548379 RAPGEF1Q13905 1077 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 KCNAB1Q14722 419 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.84□□□□□ -1.63
PTCH1-216ENST00000548379 TMTC4Q5T4D3 741 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 ICE2Q659A1 982 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 TANGO2Q6ICL3 276 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 RGS7BPQ6MZT1 257 aaPredicted RBP4.84□□□□□ -1.63
PTCH1-216ENST00000548379 MRNIPQ6NTE8 343 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 MZT2AQ6P582 158 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 FBXO38Q6PIJ6 1188 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 CCDC28AQ8IWP9 274 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 PALM2Q8IXS6 379 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 LNX2Q8N448 690 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 SPATA5Q8NB90 893 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 MYRIPQ8NFW9 859 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 DNAJB14Q8TBM8 379 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 SMCR8Q8TEV9 937 aaPredicted RBP4.84□□□□□ -1.63
PTCH1-216ENST00000548379 ZNF668Q96K58 619 aaPredicted RBP4.84□□□□□ -1.63
PTCH1-216ENST00000548379 TMEM120AQ9BXJ8 343 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.84□□□□□ -1.63
PTCH1-216ENST00000548379 LUZP4Q9P127 313 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 CA14Q9ULX7 337 aa4.84□□□□□ -1.63
PTCH1-216ENST00000548379 FER1L4A9Z1Z3 1794 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 KIF27Q86VH2 1401 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 TNIKQ9UKE5 1360 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 CENPVL1A0A0U1RR11 272 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 AQP12BA6NM10 295 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 C1QTNF3-AMACRE9PGA6 284 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 ACKR2O00590 384 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 DHHO43323 396 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 LPXNO60711 386 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 SRGAP2O75044 1071 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 PPFIA4O75335 1185 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 FGAP02671 866 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 C1SP09871 688 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 IDEP14735 1019 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 LAG3P18627 525 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 PDE6CP51160 858 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 HNRNPMP52272 730 aaKnown RBP eCLIP4.83□□□□□ -1.64
PTCH1-216ENST00000548379 FHL3Q13643 280 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 CCNIQ14094 377 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 ELF2Q15723 593 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 TRIM71Q2Q1W2 868 aaKnown RBP4.83□□□□□ -1.64
PTCH1-216ENST00000548379 PREPLQ4J6C6 727 aaPredicted RBP4.83□□□□□ -1.64
PTCH1-216ENST00000548379 CERCAMQ5T4B2 595 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 FAXCQ5TGI0 409 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 CACHD1Q5VU97 1274 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 LDHAL6AQ6ZMR3 332 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 GPR149Q86SP6 731 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 DTX2Q86UW9 622 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 SLC15A3Q8IY34 581 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 ABRAQ8N0Z2 381 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 MYCT1Q8N699 235 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 STT3BQ8TCJ2 826 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 STYXQ8WUJ0 223 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 FAM136AQ96C01 138 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 MAGEH1Q9H213 219 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 GBA2Q9HCG7 927 aaPredicted RBP4.83□□□□□ -1.64
PTCH1-216ENST00000548379 GRHPRQ9UBQ7 328 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 HPSEQ9Y251 543 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 PBRM1Q86U86 1689 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 KDM6BO15054 1643 aa4.83□□□□□ -1.64
PTCH1-216ENST00000548379 PLB1Q6P1J6 1458 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 TRGV11A0A075B6L2 103 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 AGPSO00116 658 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 RASAL1O95294 804 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 GLP2RO95838 553 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 EGR2P11161 476 aaPredicted RBP4.82□□□□□ -1.64
PTCH1-216ENST00000548379 PECAM1P16284 738 aaPredicted RBP4.82□□□□□ -1.64
PTCH1-216ENST00000548379 PPP3CBP16298 524 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 NPPBP16860 134 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 UQCRC1P31930 480 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 ATXN1P54253 815 aaKnown RBP4.82□□□□□ -1.64
PTCH1-216ENST00000548379 SP2Q02086 613 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 NSUN2Q08J23 767 aaKnown RBP eCLIP4.82□□□□□ -1.64
PTCH1-216ENST00000548379 TP53BP2Q13625 1128 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 ATP1A4Q13733 1029 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 ARHGAP15Q53QZ3 475 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 ABLIM2Q6H8Q1 611 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 LIN54Q6MZP7 749 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 GGT6Q6P531 493 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 VWA1Q6PCB0 445 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 SPARTQ8N0X7 666 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 SLC30A5Q8TAD4 765 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 TRAPPC12Q8WVT3 735 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 PPM1EQ8WY54 764 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 ATG4AQ8WYN0 398 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 LPIN2Q92539 896 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 ZNF503Q96F45 646 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms