RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 ACSF2Q96CM8 615 aaPredicted RBP21.64■■□□□ 1.05
HMGA2-211ENST00000545998 COMMD8Q9NX08 183 aa21.64■■□□□ 1.05
HMGA2-211ENST00000545998 MYO16Q9Y6X6 1858 aa21.63■■□□□ 1.05
HMGA2-211ENST00000545998 MYO10Q9HD67 2058 aa21.63■■□□□ 1.05
HMGA2-211ENST00000545998 TULP2O00295 520 aa21.63■■□□□ 1.05
HMGA2-211ENST00000545998 XPO1O14980 1071 aaKnown RBP21.63■■□□□ 1.05
HMGA2-211ENST00000545998 MED7O43513 233 aa21.63■■□□□ 1.05
HMGA2-211ENST00000545998 TADA3O75528 432 aa21.63■■□□□ 1.05
HMGA2-211ENST00000545998 SETSIPP0DME0 302 aa21.63■■□□□ 1.05
HMGA2-211ENST00000545998 GBP2P32456 591 aaPredicted RBP21.63■■□□□ 1.05
HMGA2-211ENST00000545998 SSTR3P32745 418 aaPredicted RBP21.63■■□□□ 1.05
HMGA2-211ENST00000545998 BPIFB4P59827 614 aa21.63■■□□□ 1.05
HMGA2-211ENST00000545998 MEA1Q16626 185 aa21.63■■□□□ 1.05
HMGA2-211ENST00000545998 ADAMTS19Q8TE59 1207 aa21.63■■□□□ 1.05
HMGA2-211ENST00000545998 SPAG5Q96R06 1193 aa21.63■■□□□ 1.05
HMGA2-211ENST00000545998 ATXN3LQ9H3M9 355 aa21.63■■□□□ 1.05
HMGA2-211ENST00000545998 EPS15L1Q9UBC2 864 aa21.63■■□□□ 1.05
HMGA2-211ENST00000545998 ZFP37Q9Y6Q3 630 aaPredicted RBP21.63■■□□□ 1.05
HMGA2-211ENST00000545998 FAM92AA1XBS5 289 aa21.62■■□□□ 1.05
HMGA2-211ENST00000545998 M0QYV0 167 aa21.62■■□□□ 1.05
HMGA2-211ENST00000545998 YWHAQP27348 245 aa21.62■■□□□ 1.05
HMGA2-211ENST00000545998 SOX5P35711 763 aa21.62■■□□□ 1.05
HMGA2-211ENST00000545998 TEAD2Q15562 447 aa21.62■■□□□ 1.05
HMGA2-211ENST00000545998 CACNA2D4Q7Z3S7 1137 aa21.62■■□□□ 1.05
HMGA2-211ENST00000545998 PIGZQ86VD9 579 aa21.62■■□□□ 1.05
HMGA2-211ENST00000545998 GCNAQ96QF7 691 aa21.62■■□□□ 1.05
HMGA2-211ENST00000545998 TTYH3Q9C0H2 523 aa21.62■■□□□ 1.05
HMGA2-211ENST00000545998 GDE1Q9NZC3 331 aa21.62■■□□□ 1.05
HMGA2-211ENST00000545998 CBFA2T2O43439 604 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 TPM3P06753 285 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 CFHP08603 1231 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 LAMP2P13473 410 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 STAT1P42224 750 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 PLA2G4AP47712 749 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 KIF11P52732 1056 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 IFRD2Q12894 506 aaPredicted RBP21.61■■□□□ 1.05
HMGA2-211ENST00000545998 FIGNQ5HY92 759 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 RAB41Q5JT25 222 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 ZDHHC14Q8IZN3 488 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 SLC35F5Q8WV83 523 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 BAP1Q92560 729 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 SECISBP2LQ93073 1101 aaKnown RBP21.61■■□□□ 1.05
HMGA2-211ENST00000545998 NECAB3Q96P71 396 aaPredicted RBP21.61■■□□□ 1.05
HMGA2-211ENST00000545998 FBXO44Q9H4M3 255 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 PCDHGC3Q9UN70 934 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 GFPT2O94808 682 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 CYP11B1P15538 503 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 GPD2P43304 727 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 CYP4F8P98187 520 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 TAF10Q12962 218 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 STXBP5Q5T5C0 1151 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 DENND1BQ6P3S1 775 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 SARM1Q6SZW1 724 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 PLCD3Q8N3E9 789 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 MCRS1Q96EZ8 462 aa21.61■■□□□ 1.05
HMGA2-211ENST00000545998 NUP210Q8TEM1 1887 aaPredicted RBP21.6■■□□□ 1.05
HMGA2-211ENST00000545998 AP5Z1O43299 807 aa21.6■■□□□ 1.05
HMGA2-211ENST00000545998 PPP3CCP48454 512 aa21.6■■□□□ 1.05
HMGA2-211ENST00000545998 ARHGAP15Q53QZ3 475 aa21.6■■□□□ 1.05
HMGA2-211ENST00000545998 PMF1Q6P1K2 205 aa21.6■■□□□ 1.05
HMGA2-211ENST00000545998 OVCA2Q8WZ82 227 aa21.6■■□□□ 1.05
HMGA2-211ENST00000545998 DDX1Q92499 740 aaKnown RBP21.6■■□□□ 1.05
HMGA2-211ENST00000545998 FBXO32Q969P5 355 aa21.6■■□□□ 1.05
HMGA2-211ENST00000545998 ZSWIM3Q96MP5 696 aa21.6■■□□□ 1.05
HMGA2-211ENST00000545998 SLITRK1Q96PX8 696 aa21.6■■□□□ 1.05
HMGA2-211ENST00000545998 EDEM3Q9BZQ6 932 aa21.6■■□□□ 1.05
HMGA2-211ENST00000545998 MYO6Q9UM54 1294 aa21.6■■□□□ 1.05
HMGA2-211ENST00000545998 USP3Q9Y6I4 520 aa21.6■■□□□ 1.05
HMGA2-211ENST00000545998 PDE6CP51160 858 aa21.59■■□□□ 1.05
HMGA2-211ENST00000545998 NOP9Q86U38 636 aaKnown RBP21.59■■□□□ 1.05
HMGA2-211ENST00000545998 EPS8L1Q8TE68 723 aa21.59■■□□□ 1.05
HMGA2-211ENST00000545998 KCTD13Q8WZ19 329 aa21.59■■□□□ 1.05
HMGA2-211ENST00000545998 MRPS31Q92665 395 aaKnown RBP21.59■■□□□ 1.05
HMGA2-211ENST00000545998 UHRF1Q96T88 793 aaPredicted RBP21.59■■□□□ 1.05
HMGA2-211ENST00000545998 NUP58Q9BVL2 599 aa21.59■■□□□ 1.05
HMGA2-211ENST00000545998 CD320Q9NPF0 282 aa21.59■■□□□ 1.05
HMGA2-211ENST00000545998 TRPM5Q9NZQ8 1165 aa21.59■■□□□ 1.05
HMGA2-211ENST00000545998 SCML2Q9UQR0 700 aa21.59■■□□□ 1.05
HMGA2-211ENST00000545998 NCANO14594 1321 aa21.59■■□□□ 1.05
HMGA2-211ENST00000545998 ZNF840PA6NDX5 716 aa21.58■■□□□ 1.05
HMGA2-211ENST00000545998 DDX6P26196 483 aaKnown RBP eCLIP21.58■■□□□ 1.05
HMGA2-211ENST00000545998 KRT9P35527 623 aa21.58■■□□□ 1.05
HMGA2-211ENST00000545998 GPR158Q5T848 1215 aa21.58■■□□□ 1.05
HMGA2-211ENST00000545998 TXNDC8Q6A555 127 aa21.58■■□□□ 1.05
HMGA2-211ENST00000545998 GPIHBP1Q8IV16 184 aa21.58■■□□□ 1.05
HMGA2-211ENST00000545998 GJD3Q8N144 294 aa21.58■■□□□ 1.05
HMGA2-211ENST00000545998 PDZD8Q8NEN9 1154 aa21.58■■□□□ 1.05
HMGA2-211ENST00000545998 SLITRK6Q9H5Y7 841 aa21.58■■□□□ 1.05
HMGA2-211ENST00000545998 TASP1Q9H6P5 420 aa21.58■■□□□ 1.05
HMGA2-211ENST00000545998 GMIPQ9P107 970 aa21.58■■□□□ 1.05
HMGA2-211ENST00000545998 ITIH6Q6UXX5 1313 aa21.58■■□□□ 1.04
HMGA2-211ENST00000545998 SOBPA7XYQ1 873 aa21.57■■□□□ 1.04
HMGA2-211ENST00000545998 GABBR2O75899 941 aa21.57■■□□□ 1.04
HMGA2-211ENST00000545998 ZDHHC11BP0C7U3 371 aa21.57■■□□□ 1.04
HMGA2-211ENST00000545998 PLCB2Q00722 1185 aa21.57■■□□□ 1.04
HMGA2-211ENST00000545998 SNX30Q5VWJ9 437 aa21.57■■□□□ 1.04
HMGA2-211ENST00000545998 CCDC186Q7Z3E2 898 aa21.57■■□□□ 1.04
HMGA2-211ENST00000545998 WDTC1Q8N5D0 677 aa21.57■■□□□ 1.04
HMGA2-211ENST00000545998 HSFY1Q96LI6 401 aa21.57■■□□□ 1.04
HMGA2-211ENST00000545998 ASB16Q96NS5 453 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms