RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 FOXQ1Q9C009 403 aa12.52□□□□□ -0.41
HDAC4-216ENST00000544989 CSNK1G1Q9HCP0 422 aa12.52□□□□□ -0.41
HDAC4-216ENST00000544989 DLGAP2Q9P1A6 1054 aa12.52□□□□□ -0.41
HDAC4-216ENST00000544989 ARHGAP26Q9UNA1 814 aa12.52□□□□□ -0.41
HDAC4-216ENST00000544989 CTNND2Q9UQB3 1225 aa12.52□□□□□ -0.41
HDAC4-216ENST00000544989 DENND4CQ5VZ89 1909 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 ZNF840PA6NDX5 716 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 GOLGA6L22H0YM25 854 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 BIN1O00499 593 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 CLDN5O00501 218 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 DCNP07585 359 aaKnown RBP12.51□□□□□ -0.41
HDAC4-216ENST00000544989 PRKCSHP14314 528 aaPredicted RBP12.51□□□□□ -0.41
HDAC4-216ENST00000544989 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
HDAC4-216ENST00000544989 CD58P19256 250 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 FMO5P49326 533 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 SLC5A3P53794 718 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 MARSP56192 900 aaKnown RBP12.51□□□□□ -0.41
HDAC4-216ENST00000544989 SLC7A9P82251 487 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 TAF10Q12962 218 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 NR1H3Q13133 447 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 ANGPT1Q15389 498 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 SNX30Q5VWJ9 437 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 ZC3H14Q6PJT7 736 aaKnown RBP12.51□□□□□ -0.41
HDAC4-216ENST00000544989 MAMSTRQ6ZN01 415 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 MLKLQ8NB16 471 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 SEMA4DQ92854 862 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 ATP2A3Q93084 1043 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 CYFIP2Q96F07 1278 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 DUSP9Q99956 384 aaKnown RBP12.51□□□□□ -0.41
HDAC4-216ENST00000544989 IL37Q9NZH6 218 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 GCNT4Q9P109 453 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 DACH1Q9UI36 760 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 RWDD2AQ9UIY3 292 aa12.51□□□□□ -0.41
HDAC4-216ENST00000544989 FAM92AA1XBS5 289 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 SPECC1L-ADORA2AF8WAN1 911 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 H0Y858 1186 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 SLC9A3R1O14745 358 aaPredicted RBP12.5□□□□□ -0.41
HDAC4-216ENST00000544989 TNFRSF10BO14763 440 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 CCDC130P13994 396 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 BMP6P22004 513 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 IFNAR2P48551 515 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 USP46P62068 366 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 USP4Q13107 963 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 RUNX3Q13761 415 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 MTF1Q14872 753 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 ZNF77Q15935 545 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 CAMK4Q16566 473 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 ZNF528Q3MIS6 628 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 CBWD6Q4V339 395 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 CBWD3Q5JTY5 395 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 DGKKQ5KSL6 1271 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 CBWD5Q5RIA9 395 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 PAQR9Q6ZVX9 377 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 TADA2BQ86TJ2 420 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 SYNPOQ8N3V7 929 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 CPA6Q8N4T0 437 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 ARL14EPQ8N8R7 260 aaPredicted RBP12.5□□□□□ -0.41
HDAC4-216ENST00000544989 OSCP1Q8WVF1 389 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 TMEM176AQ96HP8 235 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 HEXIM2Q96MH2 286 aaKnown RBP12.5□□□□□ -0.41
HDAC4-216ENST00000544989 LRRC3BQ96PB8 259 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 KCNK16Q96T55 309 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 FAM83CQ9BQN1 747 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 SEMA4AQ9H3S1 761 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 CLSTN2Q9H4D0 955 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 GKN1Q9NS71 199 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 CISHQ9NSE2 258 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 FAM49BQ9NUQ9 324 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 HMGXB4Q9UGU5 601 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 FBXO4Q9UKT5 387 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 KIAA1257Q9ULG3 409 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 NCOR2Q9Y618 2525 aa12.5□□□□□ -0.41
HDAC4-216ENST00000544989 ZNF638Q14966 1978 aaKnown RBP12.49□□□□□ -0.41
HDAC4-216ENST00000544989 GREB1Q4ZG55 1949 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 MIA3Q5JRA6 1907 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 C2orf78A6NCI8 922 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 LAMTOR5O43504 91 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 GFRA3O60609 400 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 OLFM2O95897 454 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 ABL1P00519 1130 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 OAS1P00973 400 aaKnown RBP12.49□□□□□ -0.41
HDAC4-216ENST00000544989 CD72P21854 359 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 TARSP26639 723 aaKnown RBP12.49□□□□□ -0.41
HDAC4-216ENST00000544989 ADORA2BP29275 332 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 CTHP32929 405 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 NBL1P41271 181 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 CACNA2D1P54289 1103 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 MAP3K7CLP57077 242 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 CUL2Q13617 745 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 CT47A1Q5JQC4 288 aaPredicted RBP12.49□□□□□ -0.41
HDAC4-216ENST00000544989 HECTD3Q5T447 861 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 SMYD5Q6GMV2 418 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 ERMP1Q7Z2K6 904 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 C12orf29Q8N999 325 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 CCDC26Q8TAB7 109 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 SH3RF2Q8TEC5 729 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 WHAMMQ8TF30 809 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 ELMO3Q96BJ8 720 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 FAM81BQ96LP2 452 aa12.49□□□□□ -0.41
HDAC4-216ENST00000544989 NT5C1BQ96P26 610 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms