RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 STXBP2Q15833 593 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 EEF1DP3Q658K8 133 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 ZNF449Q6P9G9 518 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 LRRC6Q86X45 466 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 VSIG1Q86XK7 387 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 THNSL1Q8IYQ7 743 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.98□□□□□ -0.81
CNOT4-212ENST00000541284 PYROXD1Q8WU10 500 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 SAR1AQ9NR31 198 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 METTL5Q9NRN9 209 aaKnown RBP9.98□□□□□ -0.81
CNOT4-212ENST00000541284 KRT3P12035 628 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 CETN2P41208 172 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 LAMTOR4Q0VGL1 99 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 NOMO1Q15155 1222 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 DUOXA2Q1HG44 320 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 TSHZ1Q6ZSZ6 1077 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 TAB3Q8N5C8 712 aaPredicted RBP9.98□□□□□ -0.81
CNOT4-212ENST00000541284 FAM71DQ8N9W8 422 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 WRNIP1Q96S55 665 aa9.98□□□□□ -0.81
CNOT4-212ENST00000541284 MRPL4Q9BYD3 311 aaKnown RBP9.98□□□□□ -0.81
CNOT4-212ENST00000541284 ASCC2Q9H1I8 757 aaPredicted RBP9.98□□□□□ -0.81
CNOT4-212ENST00000541284 XPO7Q9UIA9 1087 aaKnown RBP9.98□□□□□ -0.81
CNOT4-212ENST00000541284 ENTPD5O75356 428 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 PTPN4P29074 926 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 ELK3P41970 407 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 ZNF699Q32M78 642 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 WASHC2DQ5SRD0 308 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 HHATQ5VTY9 493 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 MAMDC4Q6UXC1 1216 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 C1orf127Q8N9H9 656 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 RSRC1Q96IZ7 334 aaKnown RBP9.97□□□□□ -0.81
CNOT4-212ENST00000541284 SMYD3Q9H7B4 428 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 MINDY3Q9H8M7 445 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 PNPLA8Q9NP80 782 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 SMYD2Q9NRG4 433 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 BTBD7Q9P203 1132 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 WDR91A4D1P6 747 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 GJB1P08034 283 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 PSEN1P49768 467 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 YWHAEP62258 255 aaKnown RBP9.97□□□□□ -0.81
CNOT4-212ENST00000541284 ATP11AP98196 1134 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 FAAP100Q0VG06 881 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 SETDB1Q15047 1291 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 KLHL38Q2WGJ6 581 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 FAM91A1Q658Y4 838 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 DSTYKQ6XUX3 929 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 C4orf50Q6ZRC1 276 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 ZBTB10Q96DT7 871 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 RTP4Q96DX8 246 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 KATNBL1Q9H079 304 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 FZD8Q9H461 694 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 BATF3Q9NR55 127 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 STRIP2Q9ULQ0 834 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 RPL26L1Q9UNX3 145 aaKnown RBP9.97□□□□□ -0.81
CNOT4-212ENST00000541284 CHMP2BQ9UQN3 213 aa9.97□□□□□ -0.81
CNOT4-212ENST00000541284 CCDC189A1A4V9 331 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 HMX2A2RU54 273 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 C2orf71A6NGG8 1288 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 CXorf49A8MYA2 514 aaPredicted RBP9.96□□□□□ -0.81
CNOT4-212ENST00000541284 KBTBD13C9JR72 458 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 AVILO75366 819 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 PRKCBP05771 671 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 PFKMP08237 780 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 KRT7P08729 469 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 GPD2P43304 727 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 KBTBD12Q3ZCT8 623 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 TRIM50Q86XT4 487 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 LINC01465Q8N7H1 131 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 NRG4Q8WWG1 115 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 MANSC1Q9H8J5 431 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 FBXO6Q9NRD1 293 aaPredicted RBP9.96□□□□□ -0.81
CNOT4-212ENST00000541284 ZFP69BQ9UJL9 534 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 E7ENQ6 273 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 LIN7AO14910 233 aaPredicted RBP9.96□□□□□ -0.81
CNOT4-212ENST00000541284 LGR5O75473 907 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 GCKP35557 465 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 TCF7P36402 384 aaPredicted RBP9.96□□□□□ -0.81
CNOT4-212ENST00000541284 STAT5BP51692 787 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 EFNA5P52803 228 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 PSMC1P62191 440 aaKnown RBP9.96□□□□□ -0.81
CNOT4-212ENST00000541284 MRPS5P82675 430 aaKnown RBP9.96□□□□□ -0.81
CNOT4-212ENST00000541284 PLCB3Q01970 1234 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 KHDC1Q4VXA5 237 aaKnown RBP9.96□□□□□ -0.81
CNOT4-212ENST00000541284 ANO7Q6IWH7 933 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 ZNF534Q76KX8 674 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 TTC7BQ86TV6 843 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 LRRC71Q8N4P6 559 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 TTC13Q8NBP0 860 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 APOPT1Q96IL0 206 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 POPDC2Q9HBU9 364 aa9.96□□□□□ -0.81
CNOT4-212ENST00000541284 ALG13Q9NP73 1137 aaKnown RBP9.96□□□□□ -0.81
CNOT4-212ENST00000541284 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.96□□□□□ -0.81
CNOT4-212ENST00000541284 NDC80O14777 642 aa9.96□□□□□ -0.82
CNOT4-212ENST00000541284 CILPO75339 1184 aa9.96□□□□□ -0.82
CNOT4-212ENST00000541284 SKAP2O75563 359 aaPredicted RBP9.96□□□□□ -0.82
CNOT4-212ENST00000541284 GABBR2O75899 941 aa9.96□□□□□ -0.82
CNOT4-212ENST00000541284 MICAL2O94851 1124 aa9.96□□□□□ -0.82
CNOT4-212ENST00000541284 TGDSO95455 350 aa9.96□□□□□ -0.82
CNOT4-212ENST00000541284 NFICP08651 508 aa9.96□□□□□ -0.82
CNOT4-212ENST00000541284 YBX3P16989 372 aaKnown RBP eCLIP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms