RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 EXOC3O60645 756 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 PHACTR2O75167 634 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 APBB3O95704 486 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 OLFM2O95897 454 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 F13A1P00488 732 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 ABL1P00519 1130 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 ZNF806P0C7X5 589 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 ZSCAN22P10073 491 aaPredicted RBP15.04■□□□□ -0
SNHG1-213ENST00000540725 ATICP31939 592 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 OPRD1P41143 372 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 AFMP43652 599 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 ME1P48163 572 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 TAF10Q12962 218 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 CUL4BQ13620 913 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 KNOP1Q1ED39 458 aaKnown RBP15.04■□□□□ -0
SNHG1-213ENST00000540725 TDRD10Q5VZ19 366 aaKnown RBP15.04■□□□□ -0
SNHG1-213ENST00000540725 RESP18Q5W5W9 173 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 C12orf50Q8NA57 414 aaPredicted RBP15.04■□□□□ -0
SNHG1-213ENST00000540725 B3GALNT2Q8NCR0 500 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 PLEKHO2Q8TD55 490 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 SYAP1Q96A49 352 aaPredicted RBP15.04■□□□□ -0
SNHG1-213ENST00000540725 ZC3H10Q96K80 434 aaKnown RBP15.04■□□□□ -0
SNHG1-213ENST00000540725 SLITRK1Q96PX8 696 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 B3GNT5Q9BYG0 378 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 RNF38Q9H0F5 515 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 SMPD4Q9NXE4 827 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 CPQQ9Y646 472 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 PI4KAP42356 2102 aa15.04■□□□□ -0
SNHG1-213ENST00000540725 CLDN5O00501 218 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 OAS1P00973 400 aaKnown RBP15.03■□□□□ -0
SNHG1-213ENST00000540725 CYP17A1P05093 508 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 ADRB1P08588 477 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 CASP4P49662 377 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 IFRD2Q12894 506 aaPredicted RBP15.03■□□□□ -0
SNHG1-213ENST00000540725 BIRC3Q13489 604 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 GAB4Q2WGN9 574 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 PLK5Q496M5 336 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 FILIP1Q7Z7B0 1213 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 GRAMD1CQ8IYS0 662 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 KIAA1958Q8N8K9 716 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 CCDC26Q8TAB7 109 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 CNTNAP3BQ96NU0 1288 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 CNTNAP3Q9BZ76 1288 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 SMYD3Q9H7B4 428 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 EBF1Q9UH73 591 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 PCDHGA5Q9Y5G8 931 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 USP24Q9UPU5 2620 aa15.03■□□□□ -0
SNHG1-213ENST00000540725 SCAMP3O14828 347 aaKnown RBP15.02■□□□□ -0
SNHG1-213ENST00000540725 CLSTN1O94985 981 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 HSP90AA1P07900 732 aaKnown RBP15.02■□□□□ -0
SNHG1-213ENST00000540725 PDIA4P13667 645 aaKnown RBP15.02■□□□□ -0
SNHG1-213ENST00000540725 MPLP40238 635 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 LIMK1P53667 647 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 SEC13P55735 322 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 ELF2Q15723 593 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 ZNF699Q32M78 642 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 PLA2G2CQ5R387 149 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 IL31Q6EBC2 164 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 HSCBQ8IWL3 235 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 CEP57L1Q8IYX8 460 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 NUP93Q8N1F7 819 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 TSTD1Q8NFU3 115 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 GOLGA5Q8TBA6 731 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 PARD3BQ8TEW8 1205 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 USP33Q8TEY7 942 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 DUSP15Q9H1R2 295 aaPredicted RBP15.02■□□□□ -0
SNHG1-213ENST00000540725 SMOC1Q9H4F8 434 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 VRTNQ9H8Y1 702 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 RXFP3Q9NSD7 469 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 CFAP97Q9P2B7 532 aa15.02■□□□□ -0
SNHG1-213ENST00000540725 ATP8B3O60423 1300 aa15.02□□□□□ -0.01
SNHG1-213ENST00000540725 LRRIQ3A6PVS8 624 aaPredicted RBP15.01□□□□□ -0.01
SNHG1-213ENST00000540725 K7EQS6 105 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 SLC9A3R1O14745 358 aaPredicted RBP15.01□□□□□ -0.01
SNHG1-213ENST00000540725 DCLK1O15075 740 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 KLRC4O43908 158 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 RTN3O95197 1032 aaPredicted RBP15.01□□□□□ -0.01
SNHG1-213ENST00000540725 MBL2P11226 248 aaPredicted RBP15.01□□□□□ -0.01
SNHG1-213ENST00000540725 YWHAQP27348 245 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 DGKEP52429 567 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 AP3M2P53677 418 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 CDH8P55286 799 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 DHCR24Q15392 516 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 C2orf27AQ580R0 203 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 ZNF667Q5HYK9 610 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 ATL3Q6DD88 541 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 SCARA5Q6ZMJ2 495 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 FAM35AQ86V20 835 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 DDX42Q86XP3 938 aaKnown RBP eCLIP15.01□□□□□ -0.017e-6■■■□□ 16.5
SNHG1-213ENST00000540725 ADGRG2Q8IZP9 1017 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 PDZD8Q8NEN9 1154 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 DDX1Q92499 740 aaKnown RBP15.01□□□□□ -0.01
SNHG1-213ENST00000540725 FBXO32Q969P5 355 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 SERTAD1Q9UHV2 236 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 PLXND1Q9Y4D7 1925 aa15.01□□□□□ -0.01
SNHG1-213ENST00000540725 ANTXRLA6NF34 631 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 RHOBTB1O94844 696 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 SLFN14P0C7P3 912 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 KCNA4P22459 653 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 CLDN10P78369 228 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms