RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 RXFP2Q8WXD0 754 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 IL1RAPL1Q9NZN1 696 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 ZNF112Q9UJU3 913 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 MAD1L1Q9Y6D9 718 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 CFAP73A6NFT4 308 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 ABLIM1O14639 778 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 EDF1O60869 148 aaKnown RBP14.28□□□□□ -0.12
BNIP3-202ENST00000540159 TCEA3O75764 348 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 DDNO94850 711 aaPredicted RBP14.28□□□□□ -0.12
BNIP3-202ENST00000540159 NDST1P52848 882 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 CRADDP78560 199 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 MCL1Q07820 350 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 PTK7Q13308 1070 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 KRT81Q14533 505 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 ZNF268Q14587 947 aaPredicted RBP14.28□□□□□ -0.12
BNIP3-202ENST00000540159 IER5Q5VY09 327 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 LONP2Q86WA8 852 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.28□□□□□ -0.12
BNIP3-202ENST00000540159 NAT8LQ8N9F0 302 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 NLGN2Q8NFZ4 835 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 TTC25Q96NG3 672 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 ARHGEF3Q9NR81 526 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 SIGLEC16A6NMB1 481 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 PPEF2O14830 753 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 TYROBPO43914 113 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 LPXNO60711 386 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 GM2AP17900 193 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 GMPRP36959 345 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 EFNA5P52803 228 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 ZBTB16Q05516 673 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 DPYSL3Q14195 570 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 PDK4Q16654 411 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 WLSQ5T9L3 541 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 ACOT1Q86TX2 421 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 CCDC125Q86Z20 511 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 DNERQ8NFT8 737 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 NKD2Q969F2 451 aaPredicted RBP14.27□□□□□ -0.12
BNIP3-202ENST00000540159 ZFP69BQ9UJL9 534 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 SHOC2Q9UQ13 582 aa14.27□□□□□ -0.12
BNIP3-202ENST00000540159 FARP1Q9Y4F1 1045 aaPredicted RBP14.27□□□□□ -0.12
BNIP3-202ENST00000540159 IGKV6D-21A0A0A0MT36 114 aa14.27□□□□□ -0.13
BNIP3-202ENST00000540159 TCRBV9S1A1TA0A576 114 aa14.27□□□□□ -0.13
BNIP3-202ENST00000540159 CYB561D2O14569 222 aa14.27□□□□□ -0.13
BNIP3-202ENST00000540159 LSM8O95777 96 aaKnown RBP14.27□□□□□ -0.13
BNIP3-202ENST00000540159 MT-ND3P03897 115 aa14.27□□□□□ -0.13
BNIP3-202ENST00000540159 HMGCRP04035 888 aa14.27□□□□□ -0.13
BNIP3-202ENST00000540159 GRIA1P42261 906 aa14.27□□□□□ -0.13
BNIP3-202ENST00000540159 NR1H3Q13133 447 aa14.27□□□□□ -0.13
BNIP3-202ENST00000540159 CDHR3Q6ZTQ4 885 aa14.27□□□□□ -0.13
BNIP3-202ENST00000540159 UNC5BQ8IZJ1 945 aa14.27□□□□□ -0.13
BNIP3-202ENST00000540159 AGGF1Q8N302 714 aaeCLIP14.27□□□□□ -0.13
BNIP3-202ENST00000540159 CLEC4CQ8WTT0 213 aa14.27□□□□□ -0.13
BNIP3-202ENST00000540159 DDX56Q9NY93 547 aaKnown RBP14.27□□□□□ -0.13
BNIP3-202ENST00000540159 CXorf49A8MYA2 514 aaPredicted RBP14.26□□□□□ -0.13
BNIP3-202ENST00000540159 KRT7P08729 469 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 CYP3A5P20815 502 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 RPS12P25398 132 aaKnown RBP14.26□□□□□ -0.13
BNIP3-202ENST00000540159 RBL1P28749 1068 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 GSCP56915 257 aaPredicted RBP14.26□□□□□ -0.13
BNIP3-202ENST00000540159 MOGSQ13724 837 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 CCDC142Q17RM4 750 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 RFWD3Q6PCD5 774 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 FAM183BPQ6ZVS7 135 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 SESTD1Q86VW0 696 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 SULF1Q8IWU6 871 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 CHST13Q8NET6 341 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.26□□□□□ -0.13
BNIP3-202ENST00000540159 NDRG1Q92597 394 aaKnown RBP14.26□□□□□ -0.13
BNIP3-202ENST00000540159 HPDLQ96IR7 371 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 C12orf42Q96LP6 360 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 TBC1D10AQ9BXI6 508 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 RGS17Q9UGC6 210 aaPredicted RBP14.26□□□□□ -0.13
BNIP3-202ENST00000540159 TSPAN16Q9UKR8 245 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 MRPL42Q9Y6G3 142 aaKnown RBP14.26□□□□□ -0.13
BNIP3-202ENST00000540159 USH1CQ9Y6N9 552 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 INHBAP08476 426 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 ABHD2P08910 425 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 T-ENOLP0DO92 83 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 INSRRP14616 1297 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 ICAM3P32942 547 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 BAG6P46379 1132 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 ROR1Q01973 937 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 GBP7Q8N8V2 638 aaPredicted RBP14.26□□□□□ -0.13
BNIP3-202ENST00000540159 CCHCR1Q8TD31 782 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 NLRP7Q8WX94 980 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 TMEM176AQ96HP8 235 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 MFHAS1Q9Y4C4 1052 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 CSADQ9Y600 493 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 LCTP09848 1927 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 ACKR2O00590 384 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 PDGFRBP09619 1106 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 SERPINB3P29508 390 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 MCCD1P59942 119 aaPredicted RBP14.26□□□□□ -0.13
BNIP3-202ENST00000540159 MXD4Q14582 209 aaPredicted RBP14.26□□□□□ -0.13
BNIP3-202ENST00000540159 RNF43Q68DV7 783 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 ZCCHC23Q6ZST2 131 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 BBS12Q6ZW61 710 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 ASRGL1Q7L266 308 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 C10orf82Q8WW14 230 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 HEY2Q9UBP5 337 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms