RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 CYP26B1Q9NR63 512 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 E9PBE3 544 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 KLHL41O60662 606 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 ICAM1P05362 532 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 ANPEPP15144 967 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 IVDP26440 423 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 NEK3P51956 506 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 NFIL3Q16649 462 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 ZBTB41Q5SVQ8 909 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 LPCAT4Q643R3 524 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 RHBDF2Q6PJF5 856 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 ANO5Q75V66 913 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 SIAH1Q8IUQ4 282 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 DEFB107AQ8IZN7 70 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 PTPRN2Q92932 1015 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 ZNF333Q96JL9 665 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 GCNAQ96QF7 691 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 FIZ1Q96SL8 496 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 APPL1Q9UKG1 709 aa13.49□□□□□ -0.25
MSH6-210ENST00000540021 hCG_1818297A0A087WSY0 165 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 TCRBV9S1A1TA0A576 114 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 LIN7AO14910 233 aaPredicted RBP13.48□□□□□ -0.25
MSH6-210ENST00000540021 ENTPD3O75355 529 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 ADRA2BP18089 450 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 ARL1P40616 181 aaPredicted RBP13.48□□□□□ -0.25
MSH6-210ENST00000540021 TRMT5Q32P41 509 aaKnown RBP13.48□□□□□ -0.25
MSH6-210ENST00000540021 CWF19L1Q69YN2 538 aaKnown RBP13.48□□□□□ -0.25
MSH6-210ENST00000540021 KRT80Q6KB66 452 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 SESTD1Q86VW0 696 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 C7orf43Q8WVR3 580 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 TIPINQ9BVW5 301 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 ACSS3Q9H6R3 686 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 RPAP3Q9H6T3 665 aaPredicted RBP13.48□□□□□ -0.25
MSH6-210ENST00000540021 NENFQ9UMX5 172 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 CCDC88AQ3V6T2 1871 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 GRIK3Q13003 919 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 HSP90AA5PQ58FG0 334 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 EFHC1Q5JVL4 640 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 SEPT12Q8IYM1 358 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 CEP120Q8N960 986 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 NSUN6Q8TEA1 469 aaKnown RBP13.48□□□□□ -0.25
MSH6-210ENST00000540021 CEP41Q9BYV8 373 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 NIF3L1Q9GZT8 377 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 COL20A1Q9P218 1284 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 ZNF212Q9UDV6 495 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 GRID1Q9ULK0 1009 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 PLIN4Q96Q06 1357 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 CD48P09326 243 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 UNGP13051 313 aaPredicted RBP13.48□□□□□ -0.25
MSH6-210ENST00000540021 GARTP22102 1010 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 SNRPFP62306 86 aaKnown RBP13.48□□□□□ -0.25
MSH6-210ENST00000540021 ARHGAP22Q7Z5H3 698 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 ULK2Q8IYT8 1036 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 ATG4CQ96DT6 458 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 SYT11Q9BT88 431 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 ADA2Q9NZK5 511 aa13.48□□□□□ -0.25
MSH6-210ENST00000540021 TCRBV7S3A2A0A539 114 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 ZC3H11AO75152 810 aaKnown RBP eCLIP13.47□□□□□ -0.25
MSH6-210ENST00000540021 LYPLA1O75608 230 aaPredicted RBP13.47□□□□□ -0.25
MSH6-210ENST00000540021 C6orf222P0C671 652 aaPredicted RBP13.47□□□□□ -0.25
MSH6-210ENST00000540021 ALADP13716 330 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 SERPINB5P36952 375 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 CRADDP78560 199 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 DPYSL3Q14195 570 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 PDCD2Q16342 344 aaPredicted RBP13.47□□□□□ -0.25
MSH6-210ENST00000540021 C1orf220Q5T0J3 134 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 RNASEH2BQ5TBB1 312 aaKnown RBP13.47□□□□□ -0.25
MSH6-210ENST00000540021 HEATR6Q6AI08 1181 aaKnown RBP13.47□□□□□ -0.25
MSH6-210ENST00000540021 CIAPIN1Q6FI81 312 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 MON1BQ7L1V2 547 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 SULF1Q8IWU6 871 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 CCNYL1Q8N7R7 359 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 CPT1BQ92523 772 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 RPF1Q9H9Y2 349 aaKnown RBP13.47□□□□□ -0.25
MSH6-210ENST00000540021 ZNF70Q9UC06 446 aaPredicted RBP13.47□□□□□ -0.25
MSH6-210ENST00000540021 RABGEF1Q9UJ41 708 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 LRRC42Q9Y546 428 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 MAPTP10636 758 aaKnown RBP13.47□□□□□ -0.25
MSH6-210ENST00000540021 P4HA1P13674 534 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 SDC4P31431 198 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 MSX2P35548 267 aaPredicted RBP13.47□□□□□ -0.25
MSH6-210ENST00000540021 GARSP41250 739 aaKnown RBP13.47□□□□□ -0.25
MSH6-210ENST00000540021 ACTR2P61160 394 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 AP1B1Q10567 949 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 PEX6Q13608 980 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 EML3Q32P44 896 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 MSS51Q4VC12 460 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 SERAC1Q96JX3 654 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 PDCD2LQ9BRP1 358 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 XAB2Q9HCS7 855 aaKnown RBP13.47□□□□□ -0.25
MSH6-210ENST00000540021 ZNF277Q9NRM2 450 aaPredicted RBP13.47□□□□□ -0.25
MSH6-210ENST00000540021 MYPNQ86TC9 1320 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 A0A0B4J269 797 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 APOL1O14791 398 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 ZBTB48P10074 688 aaPredicted RBP13.47□□□□□ -0.25
MSH6-210ENST00000540021 TAP1Q03518 808 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 PGM5Q15124 567 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 DBN1Q16643 649 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 SGSM1Q2NKQ1 1148 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 XKR3Q5GH77 459 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms