RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 CHORDC1Q9UHD1 332 aaPredicted RBP19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 NFE2L3Q9Y4A8 694 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 KMT2EQ8IZD2 1858 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 PATJQ8NI35 1801 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 ZNF318Q5VUA4 2279 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 TRAV19A0A0A6YYK7 116 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 FAM92AA1XBS5 289 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 ZNF263O14978 683 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 STARD6P59095 220 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 YWHAEP62258 255 aaKnown RBP19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 ZXDBP98169 803 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 PFKPQ01813 784 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 GCNT1Q02742 428 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 MLF2Q15773 248 aaPredicted RBP19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 MAN2A1Q16706 1144 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 ARHGAP17Q68EM7 881 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 ASTLQ6HA08 431 aaPredicted RBP19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 GJB7Q6PEY0 223 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 TMEM270Q6UE05 265 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 TTC30AQ86WT1 665 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 FAM114A1Q8IWE2 563 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 ENOX1Q8TC92 643 aaKnown RBP19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 BPIFB1Q8TDL5 484 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 TFAP2BQ92481 460 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 SLITRK1Q96PX8 696 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 TUBGCP2Q9BSJ2 902 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 RNF38Q9H0F5 515 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 GMIPQ9P107 970 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 PCDHB4Q9Y5E5 795 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 ZDBF2Q9HCK1 2354 aa19.35■□□□□ 0.69
SNRPA1-203ENST00000540017 TICRRQ7Z2Z1 1910 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 KCNJ18B7U540 433 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 CHADO15335 359 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 ABL1P00519 1130 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 CKMP06732 381 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 USP17L7P0C7H9 530 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 HDCP19113 662 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 CD72P21854 359 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 KCNJ12Q14500 433 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 ZNF268Q14587 947 aaPredicted RBP19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 TRIM65Q6PJ69 517 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 YAF2Q8IY57 180 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 DNASE1L2Q92874 299 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 IRF7Q92985 503 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 ZSWIM1Q9BR11 485 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 DDX23Q9BUQ8 820 aaKnown RBP19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 FOXQ1Q9C009 403 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 DNAI2Q9GZS0 605 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 UBE2TQ9NPD8 197 aaPredicted RBP19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 TRPV5Q9NQA5 729 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 ANO10Q9NW15 660 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 COMMD8Q9NX08 183 aa19.34■□□□□ 0.69
SNRPA1-203ENST00000540017 KIF26AQ9ULI4 1882 aaPredicted RBP19.33■□□□□ 0.69
SNRPA1-203ENST00000540017 TULP2O00295 520 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 STK25O00506 426 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 OLFM2O95897 454 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 OAS1P00973 400 aaKnown RBP19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 ZDHHC11BP0C7U3 371 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 CD19P15391 556 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 PON1P27169 355 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 PPP3CCP48454 512 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 CLCN5P51795 746 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 STX1AQ16623 288 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 GOLGA7BQ2TAP0 167 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 VWA3BQ502W6 1294 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 SGO2Q562F6 1265 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 TCP11X2Q5H9J9 407 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 CDKAL1Q5VV42 579 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 CAVIN1Q6NZI2 390 aaKnown RBP19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 GBP6Q6ZN66 633 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 ANKRD52Q8NB46 1076 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 OVCA2Q8WZ82 227 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 NDST4Q9H3R1 872 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 PNPLA8Q9NP80 782 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 TSPAN16Q9UKR8 245 aa19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 MTF2Q9Y483 593 aaPredicted RBP19.33■□□□□ 0.68
SNRPA1-203ENST00000540017 GTPBP10A4D1E9 387 aaKnown RBP19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 O00370 1275 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 CYP26A1O43174 497 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 PAEPP09466 180 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 VDRP11473 427 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 PRKCSHP14314 528 aaPredicted RBP19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 AOC1P19801 751 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 KIF11P52732 1056 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 ZNF132P52740 706 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 PRKCQQ04759 706 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 TNK2Q07912 1038 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 ZNF77Q15935 545 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 EXOC3L4Q17RC7 722 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 ARHGAP29Q52LW3 1261 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 SNX30Q5VWJ9 437 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 DPY19L2P1Q6NXN4 242 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 TPRG1Q6ZUI0 275 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 RBBP8NLQ8NC74 664 aaPredicted RBP19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 PDZD8Q8NEN9 1154 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 TTC8Q8TAM2 541 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 KIF9Q9HAQ2 790 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 SIX2Q9NPC8 291 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 GKN1Q9NS71 199 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 FANCLQ9NW38 375 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms