RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CCDC142Q17RM4 750 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 PMF1Q6P1K2 205 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 LRRC8DQ7L1W4 858 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 LRRC4CQ9HCJ2 640 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 TIMM13Q9Y5L4 95 aaPredicted RBP17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 E5RJQ4 531 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 PPFIA2O75334 1257 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 WARSP23381 471 aaKnown RBP17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 ACAT1P24752 427 aaKnown RBP17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 ADORA2BP29275 332 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 SSR1P43307 286 aaKnown RBP17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 IFFO1Q0D2I5 559 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 BYSLQ13895 437 aaKnown RBP17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 ZNF268Q14587 947 aaPredicted RBP17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 SPRED3Q2MJR0 410 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 ZDHHC14Q8IZN3 488 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 CACNA2D3Q8IZS8 1091 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 EMC1Q8N766 993 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 DDX27Q96GQ7 796 aaKnown RBP17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 FMO2Q99518 471 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 TXLNGYQ9BZA5 131 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 TRIM31Q9BZY9 425 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 METTL5Q9NRN9 209 aaKnown RBP17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 ATP8A1Q9Y2Q0 1164 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 C9IYK1 514 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 SKIP12755 728 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 SELPP16109 830 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 ELF1P32519 619 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 EIF3BP55884 814 aaKnown RBP17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 GPNMBQ14956 572 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 PREPLQ4J6C6 727 aaPredicted RBP17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 PAN2Q504Q3 1202 aaKnown RBP17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 ANKRD20A8PQ5CZ79 823 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 SPDYCQ5MJ68 293 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 SEL1L2Q5TEA6 688 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 ARHGAP17Q68EM7 881 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 SLC35F5Q8WV83 523 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 TLCD1Q96CP7 247 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 RAB17Q9H0T7 212 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 WDR35Q9P2L0 1181 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 HESX1Q9UBX0 185 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 OGDHLQ9ULD0 1010 aa17.92■□□□□ 0.46
PCDHB17P-201ENST00000539533 TCRBV7S2A1N4TA0A589 114 aa17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 RPL9P32969 192 aaKnown RBP17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 TAP1Q03518 808 aa17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 SLC24A5Q71RS6 500 aa17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 SLC2A14Q8TDB8 520 aa17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 MCRS1Q96EZ8 462 aa17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 PIWIL1Q96J94 861 aaKnown RBP17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 CNOT10Q9H9A5 744 aaKnown RBP17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 WBP1LQ9NX94 342 aa17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 I3L4J1 428 aa17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 PQBP1O60828 265 aaKnown RBP17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 NBNO60934 754 aa17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 MAN1A1P33908 653 aa17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 GJC1P36383 396 aa17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 ATN1P54259 1190 aaPredicted RBP17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 ATP13A4Q4VNC1 1196 aa17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 GKAP1Q5VSY0 366 aaPredicted RBP17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 DSTYKQ6XUX3 929 aa17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 RHOT1Q8IXI2 618 aa17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 NAP1L3Q99457 506 aaPredicted RBP17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 UBN1Q9NPG3 1134 aa17.91■□□□□ 0.46
PCDHB17P-201ENST00000539533 GABRDO14764 452 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 GABBR2O75899 941 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 DRD4P21917 467 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 DR1Q01658 176 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 GRIK3Q13003 919 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 TIGD5Q53EQ6 642 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 FAM102AQ5T9C2 384 aaPredicted RBP17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 KIAA0319Q5VV43 1072 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 OR6B2Q6IFH4 312 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 CPLX4Q7Z7G2 160 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 SLC13A5Q86YT5 568 aaPredicted RBP17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 B3GALNT2Q8NCR0 500 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 N4BP2L2Q92802 583 aaPredicted RBP17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 TNIP3Q96KP6 325 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 TDRD15B5MCY1 1934 aaKnown RBP17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 B3GAT3O94766 335 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 TKTP29401 623 aaKnown RBP17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 DUPD1Q68J44 220 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 FAM183BPQ6ZVS7 135 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 SCUBE3Q8IX30 993 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 ANKRD52Q8NB46 1076 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 MDM1Q8TC05 714 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 HASPINQ8TF76 798 aa17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 DDX43Q9NXZ2 648 aaKnown RBP17.9■□□□□ 0.46
PCDHB17P-201ENST00000539533 PSTPIP1O43586 416 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 PSMA2P25787 234 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 BFSP2Q13515 415 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 PIGHQ14442 188 aaPredicted RBP17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 PPP2R5EQ16537 467 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 LACTB2Q53H82 288 aaPredicted RBP17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 TXNRD3NBQ6F5E7 133 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 CD300LGQ6UXG3 332 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 HOOK3Q86VS8 718 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 DBF4BQ8NFT6 615 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 ERP44Q9BS26 406 aa17.89■□□□□ 0.45
PCDHB17P-201ENST00000539533 SLC4A5Q9BY07 1137 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms