RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 RAB20Q9NX57 234 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 DUS2Q9NX74 493 aaKnown RBP22.77■■□□□ 1.24
CCDC78-215ENST00000538176 IL37Q9NZH6 218 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 C2orf78A6NCI8 922 aa22.76■■□□□ 1.23
CCDC78-215ENST00000538176 AP1G2O75843 785 aa22.76■■□□□ 1.23
CCDC78-215ENST00000538176 LMNAP02545 664 aaKnown RBP22.76■■□□□ 1.23
CCDC78-215ENST00000538176 TNK2Q07912 1038 aa22.76■■□□□ 1.23
CCDC78-215ENST00000538176 SNX30Q5VWJ9 437 aa22.76■■□□□ 1.23
CCDC78-215ENST00000538176 SPOPLQ6IQ16 392 aa22.76■■□□□ 1.23
CCDC78-215ENST00000538176 PAQR9Q6ZVX9 377 aa22.76■■□□□ 1.23
CCDC78-215ENST00000538176 DDX42Q86XP3 938 aaKnown RBP eCLIP22.76■■□□□ 1.23
CCDC78-215ENST00000538176 SLC22A12Q96S37 553 aa22.76■■□□□ 1.23
CCDC78-215ENST00000538176 KCNK16Q96T55 309 aa22.76■■□□□ 1.23
CCDC78-215ENST00000538176 HNRNPABQ99729 332 aaKnown RBP22.76■■□□□ 1.23
CCDC78-215ENST00000538176 EBF3Q9H4W6 596 aa22.76■■□□□ 1.23
CCDC78-215ENST00000538176 MMRN2Q9H8L6 949 aa22.76■■□□□ 1.23
CCDC78-215ENST00000538176 ZSCAN32Q9NX65 697 aa22.76■■□□□ 1.23
CCDC78-215ENST00000538176 ARMCX3Q9UH62 379 aaPredicted RBP22.76■■□□□ 1.23
CCDC78-215ENST00000538176 ANAPC1Q9H1A4 1944 aa22.76■■□□□ 1.23
CCDC78-215ENST00000538176 TRDMT1O14717 391 aaKnown RBP22.75■■□□□ 1.23
CCDC78-215ENST00000538176 OLFM2O95897 454 aa22.75■■□□□ 1.23
CCDC78-215ENST00000538176 CXCL12P48061 93 aa22.75■■□□□ 1.23
CCDC78-215ENST00000538176 SOX9P48436 509 aa22.75■■□□□ 1.23
CCDC78-215ENST00000538176 IFNAR2P48551 515 aa22.75■■□□□ 1.23
CCDC78-215ENST00000538176 CACNA2D1P54289 1103 aa22.75■■□□□ 1.23
CCDC78-215ENST00000538176 GRSF1Q12849 480 aaKnown RBP eCLIP22.75■■□□□ 1.23
CCDC78-215ENST00000538176 USP4Q13107 963 aa22.75■■□□□ 1.23
CCDC78-215ENST00000538176 ASCL5Q7RTU5 278 aa22.75■■□□□ 1.23
CCDC78-215ENST00000538176 SLC2A14Q8TDB8 520 aa22.75■■□□□ 1.23
CCDC78-215ENST00000538176 SH3RF2Q8TEC5 729 aa22.75■■□□□ 1.23
CCDC78-215ENST00000538176 NELL1Q92832 810 aa22.75■■□□□ 1.23
CCDC78-215ENST00000538176 FBXO32Q969P5 355 aa22.75■■□□□ 1.23
CCDC78-215ENST00000538176 CEP63Q96MT8 703 aa22.75■■□□□ 1.23
CCDC78-215ENST00000538176 PNPLA8Q9NP80 782 aa22.75■■□□□ 1.23
CCDC78-215ENST00000538176 HPS4Q9NQG7 708 aa22.75■■□□□ 1.23
CCDC78-215ENST00000538176 ZFHX2Q9C0A1 2572 aaPredicted RBP22.75■■□□□ 1.23
CCDC78-215ENST00000538176 COL4A3Q01955 1670 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 PATJQ8NI35 1801 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 BICDL2A1A5D9 508 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 FAM92AA1XBS5 289 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 SLC9A3R1O14745 358 aaPredicted RBP22.74■■□□□ 1.23
CCDC78-215ENST00000538176 TNFRSF10BO14763 440 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 CILPO75339 1184 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 ABL1P00519 1130 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 FAM200BP0CF97 657 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 TUBP50607 506 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 CCINQ13939 588 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 PON2Q15165 354 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 TCERG1LQ5VWI1 586 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 TXNDC11Q6PKC3 985 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 FILIP1Q7Z7B0 1213 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 ZBTB44Q8NCP5 570 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 CCDC26Q8TAB7 109 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 TTC8Q8TAM2 541 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 CYFIP2Q96F07 1278 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 EEF2KMTQ96G04 330 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 ECT2Q9H8V3 914 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 APOBEC3GQ9HC16 384 aaKnown RBP22.74■■□□□ 1.23
CCDC78-215ENST00000538176 KRT82Q9NSB4 513 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 TMEM30AQ9NV96 361 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 COQ4Q9Y3A0 265 aa22.74■■□□□ 1.23
CCDC78-215ENST00000538176 KIF26AQ9ULI4 1882 aaPredicted RBP22.73■■□□□ 1.23
CCDC78-215ENST00000538176 ATG13O75143 517 aa22.73■■□□□ 1.23
CCDC78-215ENST00000538176 PAPSS2O95340 614 aaPredicted RBP22.73■■□□□ 1.23
CCDC78-215ENST00000538176 NFATC1O95644 943 aa22.73■■□□□ 1.23
CCDC78-215ENST00000538176 OAS1P00973 400 aaKnown RBP22.73■■□□□ 1.23
CCDC78-215ENST00000538176 DRD1P21728 446 aa22.73■■□□□ 1.23
CCDC78-215ENST00000538176 SLC5A3P53794 718 aa22.73■■□□□ 1.23
CCDC78-215ENST00000538176 FBXO43Q4G163 708 aa22.73■■□□□ 1.23
CCDC78-215ENST00000538176 CHMP5Q9NZZ3 219 aa22.73■■□□□ 1.23
CCDC78-215ENST00000538176 MAN1B1Q9UKM7 699 aa22.73■■□□□ 1.23
CCDC78-215ENST00000538176 R4GN57 208 aa22.73■■□□□ 1.23
CCDC78-215ENST00000538176 IFRD2Q12894 506 aaPredicted RBP22.72■■□□□ 1.23
CCDC78-215ENST00000538176 DCAF17Q5H9S7 520 aaPredicted RBP22.72■■□□□ 1.23
CCDC78-215ENST00000538176 TMEM196Q5HYL7 178 aa22.72■■□□□ 1.23
CCDC78-215ENST00000538176 HECTD3Q5T447 861 aa22.72■■□□□ 1.23
CCDC78-215ENST00000538176 TRIM68Q6AZZ1 485 aa22.72■■□□□ 1.23
CCDC78-215ENST00000538176 C12orf29Q8N999 325 aa22.72■■□□□ 1.23
CCDC78-215ENST00000538176 ERCC4Q92889 916 aaPredicted RBP22.72■■□□□ 1.23
CCDC78-215ENST00000538176 ELMO3Q96BJ8 720 aa22.72■■□□□ 1.23
CCDC78-215ENST00000538176 RNF38Q9H0F5 515 aa22.72■■□□□ 1.23
CCDC78-215ENST00000538176 TBC1D14Q9P2M4 693 aa22.72■■□□□ 1.23
CCDC78-215ENST00000538176 FANCMQ8IYD8 2048 aa22.72■■□□□ 1.23
CCDC78-215ENST00000538176 LEFTY2O00292 366 aa22.71■■□□□ 1.23
CCDC78-215ENST00000538176 PMM2O15305 246 aa22.71■■□□□ 1.23
CCDC78-215ENST00000538176 ZDHHC11BP0C7U3 371 aa22.71■■□□□ 1.23
CCDC78-215ENST00000538176 CCDC130P13994 396 aa22.71■■□□□ 1.23
CCDC78-215ENST00000538176 GJA4P35212 333 aa22.71■■□□□ 1.23
CCDC78-215ENST00000538176 PMS1P54277 932 aaKnown RBP22.71■■□□□ 1.23
CCDC78-215ENST00000538176 MAP3K7CLP57077 242 aa22.71■■□□□ 1.23
CCDC78-215ENST00000538176 UBE2HP62256 183 aa22.71■■□□□ 1.23
CCDC78-215ENST00000538176 YWHAEP62258 255 aaKnown RBP22.71■■□□□ 1.23
CCDC78-215ENST00000538176 CETN1Q12798 172 aa22.71■■□□□ 1.23
CCDC78-215ENST00000538176 EML3Q32P44 896 aa22.71■■□□□ 1.23
CCDC78-215ENST00000538176 TRIML1Q8N9V2 468 aa22.71■■□□□ 1.23
CCDC78-215ENST00000538176 SMOQ99835 787 aa22.71■■□□□ 1.23
CCDC78-215ENST00000538176 TLR8Q9NR97 1041 aaKnown RBP22.71■■□□□ 1.23
CCDC78-215ENST00000538176 FAM49BQ9NUQ9 324 aa22.71■■□□□ 1.23
CCDC78-215ENST00000538176 HMGXB4Q9UGU5 601 aa22.71■■□□□ 1.23
CCDC78-215ENST00000538176 CHORDC1Q9UHD1 332 aaPredicted RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms