RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 ORC1Q13415 861 aa9.87□□□□□ -0.83
USP28-205ENST00000537706 KIF19Q2TAC6 998 aa9.87□□□□□ -0.83
USP28-205ENST00000537706 SGO2Q562F6 1265 aa9.87□□□□□ -0.83
USP28-205ENST00000537706 FBXL19Q6PCT2 694 aa9.87□□□□□ -0.83
USP28-205ENST00000537706 SKA1Q96BD8 255 aa9.87□□□□□ -0.83
USP28-205ENST00000537706 CCDC97Q96F63 343 aaPredicted RBP9.87□□□□□ -0.83
USP28-205ENST00000537706 TCEANC2Q96MN5 208 aa9.87□□□□□ -0.83
USP28-205ENST00000537706 GCNT4Q9P109 453 aa9.87□□□□□ -0.83
USP28-205ENST00000537706 CLCA2Q9UQC9 943 aa9.87□□□□□ -0.83
USP28-205ENST00000537706 ANKRD6Q9Y2G4 727 aa9.87□□□□□ -0.83
USP28-205ENST00000537706 SNX11Q9Y5W9 270 aa9.87□□□□□ -0.83
USP28-205ENST00000537706 USP9XQ93008 2570 aaPredicted RBP9.86□□□□□ -0.83
USP28-205ENST00000537706 MYO16Q9Y6X6 1858 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 A0A1W2PQF6 199 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 CCDC169A6NNP5 214 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 CYP11A1P05108 521 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 ITGAVP06756 1048 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 CHRM1P11229 460 aaPredicted RBP9.86□□□□□ -0.83
USP28-205ENST00000537706 MATR3P43243 847 aaKnown RBP eCLIP9.86□□□□□ -0.83
USP28-205ENST00000537706 PPP2R3AQ06190 1150 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 SSRP1Q08945 709 aaKnown RBP9.86□□□□□ -0.83
USP28-205ENST00000537706 KRT32Q14532 448 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 POTEDQ86YR6 584 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 SFTPA1Q8IWL2 248 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 TSC1Q92574 1164 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 MRGPRX1Q96LB2 322 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 SLC22A12Q96S37 553 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 KIFC3Q9BVG8 833 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 TMEM134Q9H6X4 195 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 PTPRHQ9HD43 1115 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 PTPRDP23468 1912 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 LAMA5O15230 3695 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 ANO9A1A5B4 782 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 GFRA2O00451 464 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 PAPSS1O43252 624 aaPredicted RBP9.86□□□□□ -0.83
USP28-205ENST00000537706 ACADMP11310 421 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 IFNAR1P17181 557 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 ABCB4P21439 1286 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 GRIA4P48058 902 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 CLDN6P56747 220 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 C21orf59P57076 290 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 ERVPABLB-1P60509 514 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 NOLC1Q14978 699 aaKnown RBP eCLIP9.86□□□□□ -0.83
USP28-205ENST00000537706 KYAT1Q16773 422 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 SLC10A6Q3KNW5 377 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 ZC2HC1CQ53FD0 456 aaPredicted RBP9.86□□□□□ -0.83
USP28-205ENST00000537706 GRAMD4Q6IC98 578 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 TERB1Q8NA31 727 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 OTUB2Q96DC9 234 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 LIN37Q96GY3 246 aaPredicted RBP9.86□□□□□ -0.83
USP28-205ENST00000537706 MYRFLQ96LU7 910 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 NUP58Q9BVL2 599 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 TUFT1Q9NNX1 390 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 EHD2Q9NZN4 543 aa9.86□□□□□ -0.83
USP28-205ENST00000537706 PTPRQQ9UMZ3 2332 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 GOLGA4Q13439 2230 aaKnown RBP9.85□□□□□ -0.83
USP28-205ENST00000537706 K7ENP7 123 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 M0R2N6 131 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 YKT6O15498 198 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 TADA3O75528 432 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 AFMP43652 599 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 ACADVLP49748 655 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 LILRA4P59901 499 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 STRN3Q13033 797 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 NECTIN1Q15223 517 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 E2F5Q15329 346 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 INO80CQ6PI98 192 aaPredicted RBP9.85□□□□□ -0.83
USP28-205ENST00000537706 RHBDF2Q6PJF5 856 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 CCDC81Q6ZN84 652 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 C12orf40Q86WS4 652 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 MMS19Q96T76 1030 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 GABRG3Q99928 467 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 TARS2Q9BW92 718 aaKnown RBP9.85□□□□□ -0.83
USP28-205ENST00000537706 LRRC4CQ9HCJ2 640 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 ABCB6Q9NP58 842 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 THSD1Q9NS62 852 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 TRPM5Q9NZQ8 1165 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 ADAMTS1Q9UHI8 967 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 STARD13Q9Y3M8 1113 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 WDFY3Q8IZQ1 3526 aa9.85□□□□□ -0.83
USP28-205ENST00000537706 H0Y8X5 98 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 SUV39H1O43463 412 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 DEXIO95424 95 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 CLTAP09496 248 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 KRT10P13645 584 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 GSPT1P15170 499 aaKnown RBP9.84□□□□□ -0.83
USP28-205ENST00000537706 XBP1P17861 261 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 E2F1Q01094 437 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 CALCRLQ16602 461 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 KIAA1614Q5VZ46 1190 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 ERMNQ8TAM6 284 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 HIC2Q96JB3 615 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 LSG1Q9H089 658 aaKnown RBP9.84□□□□□ -0.83
USP28-205ENST00000537706 OSGEPQ9NPF4 335 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 ITM2CQ9NQX7 267 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 USP36Q9P275 1121 aaKnown RBP9.84□□□□□ -0.83
USP28-205ENST00000537706 GON4LQ3T8J9 2241 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 A0A087WWV3 80 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 C2orf78A6NCI8 922 aa9.84□□□□□ -0.83
USP28-205ENST00000537706 CYB561D2O14569 222 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms