RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 EPHB3P54753 998 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 TWF1Q12792 350 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 VEPH1Q14D04 833 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 CCDC142Q17RM4 750 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 FILIP1LQ4L180 1135 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 ITIH5Q86UX2 942 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 FAM35AQ86V20 835 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 TTC9BQ8N6N2 239 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 LEMD2Q8NC56 503 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 SMARCD1Q96GM5 515 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 TMEM176AQ96HP8 235 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 TWNKQ96RR1 684 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 MYADMQ96S97 322 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 SIX2Q9NPC8 291 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 PLCB1Q9NQ66 1216 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 ADGRG1Q9Y653 693 aa13.45□□□□□ -0.26
DDB1-207ENST00000535967 CLUHO75153 1309 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 BHMG1C9JSJ3 638 aaPredicted RBP13.44□□□□□ -0.26
DDB1-207ENST00000535967 TRIM66O15016 1216 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 PAEPP09466 180 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 ATF6P18850 670 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 ACO1P21399 889 aaKnown RBP13.44□□□□□ -0.26
DDB1-207ENST00000535967 RAD23BP54727 409 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 KCNMA1Q12791 1236 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 IQCEQ6IPM2 695 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 NUDT18Q6ZVK8 323 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 RRAGAQ7L523 313 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 PACS2Q86VP3 889 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 SLC4A11Q8NBS3 891 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 KREMEN1Q96MU8 473 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 ERGIC2Q96RQ1 377 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 B3GNT5Q9BYG0 378 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 UBE2TQ9NPD8 197 aaPredicted RBP13.44□□□□□ -0.26
DDB1-207ENST00000535967 AVENQ9NQS1 362 aaPredicted RBP13.44□□□□□ -0.26
DDB1-207ENST00000535967 CA14Q9ULX7 337 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 CNTN6Q9UQ52 1028 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 SLC27A5Q9Y2P5 690 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 R4GN57 208 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 ACACBO00763 2458 aa13.44□□□□□ -0.26
DDB1-207ENST00000535967 PTPN2P17706 415 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 CYP2F1P24903 491 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 ANXA13P27216 316 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 GBP2P32456 591 aaPredicted RBP13.43□□□□□ -0.26
DDB1-207ENST00000535967 ORC1Q13415 861 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 ZNF394Q53GI3 561 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 TMEM270Q6UE05 265 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 ERMP1Q7Z2K6 904 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 FUKQ8N0W3 1084 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 SHC3Q92529 594 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 KAT5Q92993 513 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 PSMG2Q969U7 264 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 SPATA17Q96L03 361 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 C8orf48Q96LL4 319 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 ZNF512Q96ME7 567 aaPredicted RBP13.43□□□□□ -0.26
DDB1-207ENST00000535967 HNRNPABQ99729 332 aaKnown RBP13.43□□□□□ -0.26
DDB1-207ENST00000535967 ANP32EQ9BTT0 268 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 MED10Q9BTT4 135 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 LSM14BQ9BX40 385 aaKnown RBP13.43□□□□□ -0.26
DDB1-207ENST00000535967 WDR6Q9NNW5 1121 aaKnown RBP13.43□□□□□ -0.26
DDB1-207ENST00000535967 FAM49BQ9NUQ9 324 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 CEP72Q9P209 647 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 IGSF9Q9P2J2 1179 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 KIAA1257Q9ULG3 409 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 SIK3Q9Y2K2 1263 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 PCDHB4Q9Y5E5 795 aa13.43□□□□□ -0.26
DDB1-207ENST00000535967 KIF26AQ9ULI4 1882 aaPredicted RBP13.42□□□□□ -0.26
DDB1-207ENST00000535967 A0A1B0GTH6 734 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 FGF19O95750 216 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 SERPINC1P01008 464 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 CSH1P0DML2 217 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 CSH2P0DML3 217 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 VDRP11473 427 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 CCDC130P13994 396 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 BDNFP23560 247 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 ZNF132P52740 706 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 EPHA5P54756 1037 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 UBXN1Q04323 297 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 STILQ15468 1287 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 PABPC1LQ4VXU2 614 aaKnown RBP13.42□□□□□ -0.26
DDB1-207ENST00000535967 SGO2Q562F6 1265 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 KLHDC7AQ5VTJ3 777 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 ARHGAP17Q68EM7 881 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 DPY19L2P1Q6NXN4 242 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 SLC44A3Q8N4M1 653 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 RBBP8NLQ8NC74 664 aaPredicted RBP13.42□□□□□ -0.26
DDB1-207ENST00000535967 SLC2A14Q8TDB8 520 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 RMDN1Q96DB5 314 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 CYFIP2Q96F07 1278 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 ZNF518BQ9C0D4 1074 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 TBC1D17Q9HA65 648 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 DMAP1Q9NPF5 467 aaPredicted RBP13.42□□□□□ -0.26
DDB1-207ENST00000535967 ASAH2Q9NR71 780 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 KRT82Q9NSB4 513 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 EHD2Q9NZN4 543 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 DNAJC12Q9UKB3 198 aa13.42□□□□□ -0.26
DDB1-207ENST00000535967 MED19A0JLT2 244 aaPredicted RBP13.41□□□□□ -0.26
DDB1-207ENST00000535967 SOAT2O75908 522 aa13.41□□□□□ -0.26
DDB1-207ENST00000535967 MICAL2O94851 1124 aa13.41□□□□□ -0.26
DDB1-207ENST00000535967 DCNP07585 359 aaKnown RBP13.41□□□□□ -0.26
DDB1-207ENST00000535967 RHOP08100 348 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms