RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 ZNF518BQ9C0D4 1074 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 RNF38Q9H0F5 515 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 DUSP15Q9H1R2 295 aaPredicted RBP24.34■■□□□ 1.49
PKP3-210ENST00000533249 TMEM30AQ9NV96 361 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 NXF1Q9UBU9 619 aaKnown RBP24.34■■□□□ 1.49
PKP3-210ENST00000533249 INVSQ9Y283 1065 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 CPQQ9Y646 472 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 CNOT1A5YKK6 2376 aaKnown RBP24.34■■□□□ 1.49
PKP3-210ENST00000533249 A8MXQ7 604 aa24.33■■□□□ 1.49
PKP3-210ENST00000533249 CLDN5O00501 218 aa24.33■■□□□ 1.49
PKP3-210ENST00000533249 POLR2DO15514 142 aaKnown RBP24.33■■□□□ 1.49
PKP3-210ENST00000533249 MYL6P60660 151 aa24.33■■□□□ 1.49
PKP3-210ENST00000533249 TAF10Q12962 218 aa24.33■■□□□ 1.49
PKP3-210ENST00000533249 STPG1Q5TH74 334 aa24.33■■□□□ 1.49
PKP3-210ENST00000533249 TDRD10Q5VZ19 366 aaKnown RBP24.33■■□□□ 1.49
PKP3-210ENST00000533249 USP33Q8TEY7 942 aa24.33■■□□□ 1.49
PKP3-210ENST00000533249 ELOVL4Q9GZR5 314 aa24.33■■□□□ 1.49
PKP3-210ENST00000533249 SLC39A2Q9NP94 309 aa24.33■■□□□ 1.49
PKP3-210ENST00000533249 EBF1Q9UH73 591 aa24.33■■□□□ 1.49
PKP3-210ENST00000533249 ANTXRLA6NF34 631 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 PHACTR2O75167 634 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 CLSTN1O94985 981 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 CYP17A1P05093 508 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 GBP1P32455 592 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 PPP3CCP48454 512 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 SLC7A9P82251 487 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 EHHADHQ08426 723 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 GAB4Q2WGN9 574 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 TCEAL6Q6IPX3 200 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 CCDC26Q8TAB7 109 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 TCEAL3Q969E4 200 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 SLITRK1Q96PX8 696 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 B3GNT5Q9BYG0 378 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 TPSD1Q9BZJ3 242 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 GZF1Q9H116 711 aaPredicted RBP24.32■■□□□ 1.48
PKP3-210ENST00000533249 MAGEF1Q9HAY2 307 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 VPS45Q9NRW7 570 aa24.32■■□□□ 1.48
PKP3-210ENST00000533249 K7EQS6 105 aa24.31■■□□□ 1.48
PKP3-210ENST00000533249 RHOBTB1O94844 696 aa24.31■■□□□ 1.48
PKP3-210ENST00000533249 FAM163BP0C2L3 166 aa24.31■■□□□ 1.48
PKP3-210ENST00000533249 CASP4P49662 377 aa24.31■■□□□ 1.48
PKP3-210ENST00000533249 SNRPFP62306 86 aaKnown RBP24.31■■□□□ 1.48
PKP3-210ENST00000533249 CREB5Q02930 508 aa24.31■■□□□ 1.48
PKP3-210ENST00000533249 CCDC33Q8N5R6 958 aa24.31■■□□□ 1.48
PKP3-210ENST00000533249 B3GALNT2Q8NCR0 500 aa24.31■■□□□ 1.48
PKP3-210ENST00000533249 CFAP97Q9P2B7 532 aa24.31■■□□□ 1.48
PKP3-210ENST00000533249 EXOC3O60645 756 aa24.3■■□□□ 1.48
PKP3-210ENST00000533249 OLFM2O95897 454 aa24.3■■□□□ 1.48
PKP3-210ENST00000533249 OAS1P00973 400 aaKnown RBP24.3■■□□□ 1.48
PKP3-210ENST00000533249 MBL2P11226 248 aaPredicted RBP24.3■■□□□ 1.48
PKP3-210ENST00000533249 AFMP43652 599 aa24.3■■□□□ 1.48
PKP3-210ENST00000533249 BIRC3Q13489 604 aa24.3■■□□□ 1.48
PKP3-210ENST00000533249 DHCR24Q15392 516 aa24.3■■□□□ 1.48
PKP3-210ENST00000533249 ANO7Q6IWH7 933 aa24.3■■□□□ 1.48
PKP3-210ENST00000533249 TTC30AQ86WT1 665 aa24.3■■□□□ 1.48
PKP3-210ENST00000533249 ADGRG2Q8IZP9 1017 aa24.3■■□□□ 1.48
PKP3-210ENST00000533249 SYAP1Q96A49 352 aaPredicted RBP24.3■■□□□ 1.48
PKP3-210ENST00000533249 XYLT2Q9H1B5 865 aa24.3■■□□□ 1.48
PKP3-210ENST00000533249 SLC9A3R1O14745 358 aaPredicted RBP24.29■■□□□ 1.48
PKP3-210ENST00000533249 TM4SF5O14894 197 aa24.29■■□□□ 1.48
PKP3-210ENST00000533249 KRT37O76014 449 aa24.29■■□□□ 1.48
PKP3-210ENST00000533249 STAU1O95793 577 aaKnown RBP24.29■■□□□ 1.48
PKP3-210ENST00000533249 ATICP31939 592 aa24.29■■□□□ 1.48
PKP3-210ENST00000533249 CDH8P55286 799 aa24.29■■□□□ 1.48
PKP3-210ENST00000533249 CUL4BQ13620 913 aa24.29■■□□□ 1.48
PKP3-210ENST00000533249 USP39Q53GS9 565 aaKnown RBP24.29■■□□□ 1.48
PKP3-210ENST00000533249 NUP93Q8N1F7 819 aa24.29■■□□□ 1.48
PKP3-210ENST00000533249 SMYD3Q9H7B4 428 aa24.29■■□□□ 1.48
PKP3-210ENST00000533249 MMP17Q9ULZ9 603 aa24.29■■□□□ 1.48
PKP3-210ENST00000533249 CAVIN2O95810 425 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 YWHAQP27348 245 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 SLC6A11P48066 632 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 ME1P48163 572 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 KNOP1Q1ED39 458 aaKnown RBP24.28■■□□□ 1.48
PKP3-210ENST00000533249 BMT2Q1RMZ1 405 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 RNF43Q68DV7 783 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 SCARA5Q6ZMJ2 495 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 SFTPA1Q8IWL2 248 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 C12orf56Q8IXR9 622 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 GRAMD1CQ8IYS0 662 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 PLEKHO2Q8TD55 490 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 FBXO32Q969P5 355 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 ELMO3Q96BJ8 720 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 CHAMP1Q96JM3 812 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 KCNK16Q96T55 309 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 MED10Q9BTT4 135 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 FAM13BQ9NYF5 915 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 CGNQ9P2M7 1197 aaKnown RBP24.28■■□□□ 1.48
PKP3-210ENST00000533249 ABCA7Q8IZY2 2146 aa24.28■■□□□ 1.48
PKP3-210ENST00000533249 CHD8Q9HCK8 2581 aa24.27■■□□□ 1.48
PKP3-210ENST00000533249 MYOFQ9NZM1 2061 aa24.27■■□□□ 1.48
PKP3-210ENST00000533249 PVALEFA0A1B0GWK0 134 aa24.27■■□□□ 1.48
PKP3-210ENST00000533249 BCLAF3A2AJT9 711 aaKnown RBP24.27■■□□□ 1.48
PKP3-210ENST00000533249 RTN3O95197 1032 aaPredicted RBP24.27■■□□□ 1.48
PKP3-210ENST00000533249 MESP2Q0VG99 397 aa24.27■■□□□ 1.48
PKP3-210ENST00000533249 ZNF699Q32M78 642 aa24.27■■□□□ 1.48
PKP3-210ENST00000533249 N4BP2L1Q5TBK1 243 aaPredicted RBP24.27■■□□□ 1.48
PKP3-210ENST00000533249 RHBDF2Q6PJF5 856 aa24.27■■□□□ 1.48
PKP3-210ENST00000533249 DDX42Q86XP3 938 aaKnown RBP eCLIP24.27■■□□□ 1.48
PKP3-210ENST00000533249 KIAA1958Q8N8K9 716 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms