RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 MYL5Q02045 173 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 ANO6Q4KMQ2 910 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 ARHGAP15Q53QZ3 475 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 SNX30Q5VWJ9 437 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 DHX40Q8IX18 779 aaKnown RBP14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 ANKRD52Q8NB46 1076 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 MRPS31Q92665 395 aaKnown RBP14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 USP13Q92995 863 aaPredicted RBP14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 BPIFA3Q9BQP9 254 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 UBXN6Q9BZV1 441 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 SMG9Q9H0W8 520 aaKnown RBP14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 PNPLA8Q9NP80 782 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 TAB2Q9NYJ8 693 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 WNT16Q9UBV4 365 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 APEX2Q9UBZ4 518 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 CHORDC1Q9UHD1 332 aaPredicted RBP14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 ZMYM5Q9UJ78 669 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 KIAA1257Q9ULG3 409 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 CCL26Q9Y258 94 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 PCDHB4Q9Y5E5 795 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 USP3Q9Y6I4 520 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 ZNF318Q5VUA4 2279 aa14.75□□□□□ -0.05
TSPAN4-220ENST00000532375 COL4A3Q01955 1670 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 ZDBF2Q9HCK1 2354 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 PRR33A8MZF0 331 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 TULP2O00295 520 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 GABBR2O75899 941 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 RTN3O95197 1032 aaPredicted RBP14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 OLFM2O95897 454 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 PRKCSHP14314 528 aaPredicted RBP14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 PSMC3P17980 439 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 KIF11P52732 1056 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 FCHO2Q0JRZ9 810 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 IQCB1Q15051 598 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 RAB41Q5JT25 222 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 TMEM31Q5JXX7 168 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 HFE2Q6ZVN8 426 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 RBBP8NLQ8NC74 664 aaPredicted RBP14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 SHC3Q92529 594 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 GCNAQ96QF7 691 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 RNF38Q9H0F5 515 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 SLITRK6Q9H5Y7 841 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 OBP2AQ9NY56 170 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 EHD2Q9NZN4 543 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 LIMA1Q9UHB6 759 aaKnown RBP14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 TSPAN16Q9UKR8 245 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 F5P12259 2224 aa14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 HELZP42694 1942 aaKnown RBP14.74□□□□□ -0.05
TSPAN4-220ENST00000532375 SYCE3A1L190 88 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 OAS1P00973 400 aaKnown RBP14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 CFHP08603 1231 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 ATP1A3P13637 1013 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 PTMSP20962 102 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 PPP3CCP48454 512 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 GRM2Q14416 872 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 ZNF268Q14587 947 aaPredicted RBP14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 CNGA2Q16280 664 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 SGO2Q562F6 1265 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 SMYD5Q6GMV2 418 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 LCLAT1Q6UWP7 414 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 ENOSF1Q7L5Y1 443 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 PIGZQ86VD9 579 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 AOPEPQ8N6M6 819 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 DEPDC1BQ8WUY9 529 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 OVCA2Q8WZ82 227 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 E2F7Q96AV8 911 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 NAA15Q9BXJ9 866 aaKnown RBP14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 VPS16Q9H269 839 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 ACP6Q9NPH0 428 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 TRPM5Q9NZQ8 1165 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 SCML2Q9UQR0 700 aa14.73□□□□□ -0.05
TSPAN4-220ENST00000532375 TICRRQ7Z2Z1 1910 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 MYO16Q9Y6X6 1858 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 LETM1O95202 739 aaPredicted RBP14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 PFKLP17858 780 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 TRIM21P19474 475 aaKnown RBP14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 COPB1P53618 953 aaKnown RBP14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 PDE4CQ08493 712 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 GOLGA7BQ2TAP0 167 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 KLHDC7AQ5VTJ3 777 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 CELF5Q8N6W0 485 aaKnown RBP14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 ARL14EPQ8N8R7 260 aaPredicted RBP14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 SLC35F5Q8WV83 523 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 SLITRK1Q96PX8 696 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 TRMT61BQ9BVS5 477 aaKnown RBP14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 DNAI2Q9GZS0 605 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 NMUR1Q9HB89 426 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 TRPV5Q9NQA5 729 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 TDP1Q9NUW8 608 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 OSER1Q9NX31 292 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 GMIPQ9P107 970 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 DNAJC12Q9UKB3 198 aa14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.72□□□□□ -0.05
TSPAN4-220ENST00000532375 FOXN3O00409 490 aaPredicted RBP14.71□□□□□ -0.05
TSPAN4-220ENST00000532375 XPO1O14980 1071 aaKnown RBP14.71□□□□□ -0.05
TSPAN4-220ENST00000532375 CHADO15335 359 aa14.71□□□□□ -0.05
TSPAN4-220ENST00000532375 CD19P15391 556 aa14.71□□□□□ -0.05
TSPAN4-220ENST00000532375 TCF3P15923 654 aa14.71□□□□□ -0.05
TSPAN4-220ENST00000532375 HDCP19113 662 aa14.71□□□□□ -0.05
TSPAN4-220ENST00000532375 BRD2P25440 801 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms