RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 C12orf56Q8IXR9 622 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 DRC7Q8IY82 874 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 EFCAB13Q8IY85 973 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 TMEM130Q8N3G9 435 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 C12orf76Q8N812 135 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 ANKRD42Q8N9B4 389 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 XXYLT1Q8NBI6 393 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 APPL2Q8NEU8 664 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 SNIP1Q8TAD8 396 aaKnown RBP6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 JPH3Q8WXH2 748 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 DDX1Q92499 740 aaKnown RBP6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 SMARCE1Q969G3 411 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 CCDC127Q96BQ5 260 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 PLD4Q96BZ4 506 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 GSDMAQ96QA5 445 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 UHRF1Q96T88 793 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 CLSTN3Q9BQT9 956 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 HERPUD2Q9BSE4 406 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 DHRS4Q9BTZ2 278 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 APOL5Q9BWW9 433 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 COL25A1Q9BXS0 654 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 S1PR5Q9H228 398 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 ADAM7Q9H2U9 754 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 SFXN1Q9H9B4 322 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 PDE11AQ9HCR9 933 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 MAN1C1Q9NR34 630 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 DPP3Q9NY33 737 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 MTRRQ9UBK8 725 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 DAAM1Q9Y4D1 1078 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 USP15Q9Y4E8 981 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 BACE2Q9Y5Z0 518 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 CDY1Q9Y6F8 540 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 PLXNA4Q9HCM2 1894 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 COL6A3P12111 3177 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ARHGEF37A1IGU5 675 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 VSTM5A8MXK1 200 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 M0QZQ0 153 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 PPEF2O14830 753 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ADAM12O43184 909 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ABLIM3O94929 683 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ATE1O95260 518 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 TNNC2P02585 160 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 NR3C1P04150 777 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ITGB3P05106 788 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 KRT19P08727 400 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 TMEM191BP0C7N4 346 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 DLATP10515 647 aaKnown RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ODC1P11926 461 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 TIMP2P16035 220 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 TNNI1P19237 187 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 RPL13P26373 211 aaKnown RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 PNPLA4P41247 253 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 AARSP49588 968 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 TAF6P49848 677 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ARPP19P56211 112 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 LILRA4P59901 499 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 RBP5P82980 135 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 YWHAHQ04917 246 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 FOXC1Q12948 553 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 PSMD6Q15008 389 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 DUOXA2Q1HG44 320 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 SV2CQ496J9 727 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 CTXN3Q4LDR2 81 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 RPS26P11Q5JNZ5 115 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ATAT1Q5SQI0 421 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 RARS2Q5T160 578 aaKnown RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 LIN9Q5TKA1 542 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 PEAR1Q5VY43 1037 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 SLC8B1Q6J4K2 584 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 LILRA6Q6PI73 481 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 VHLLQ6RSH7 139 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 TMC5Q6UXY8 1006 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 USP37Q86T82 979 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ZNF354CQ86Y25 554 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 WDR49Q8IV35 697 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ADHFE1Q8IWW8 467 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ELOA2Q8IYF1 753 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 SMYD4Q8IYR2 804 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 GUF1Q8N442 669 aaKnown RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 TAB3Q8N5C8 712 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 CSGALNACT2Q8N6G5 542 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 KREMEN2Q8NCW0 462 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 HDAC7Q8WUI4 952 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ERCC4Q92889 916 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 KISS1RQ969F8 398 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 TTC17Q96AE7 1141 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ANKRD36BP1Q96IX9 119 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 SENP8Q96LD8 212 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 RIPOR3Q96MK2 946 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ZNF560Q96MR9 790 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 NECTIN4Q96NY8 510 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 FNBP1Q96RU3 617 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 POP1Q99575 1024 aaKnown RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ELAC2Q9BQ52 826 aaKnown RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 GTPBP4Q9BZE4 634 aaKnown RBP6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 MTMR12Q9C0I1 747 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 KCTD10Q9H3F6 313 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 PLEKHA4Q9H4M7 779 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 FBXL5Q9UKA1 691 aa6.2□□□□□ -1.42
HMGB1P42-201ENST00000532126 ITGA11Q9UKX5 1188 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms