RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 ADAM7Q9H2U9 754 aa17.87■□□□□ 0.45
SF3B2-211ENST00000531041 CYLDQ9NQC7 956 aa17.87■□□□□ 0.45
SF3B2-211ENST00000531041 ZNHIT6Q9NWK9 470 aaKnown RBP17.87■□□□□ 0.45
SF3B2-211ENST00000531041 COMMD8Q9NX08 183 aa17.87■□□□□ 0.45
SF3B2-211ENST00000531041 EHD2Q9NZN4 543 aa17.87■□□□□ 0.45
SF3B2-211ENST00000531041 CYP1A1P04798 512 aaPredicted RBP17.86■□□□□ 0.45
SF3B2-211ENST00000531041 TNFAIP3P21580 790 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 SLC5A3P53794 718 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 EPHA5P54756 1037 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 NOMO3P69849 1222 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 MTMR3Q13615 1198 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 TAF12Q16514 161 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 TDRD12Q587J7 1177 aaKnown RBP17.86■□□□□ 0.45
SF3B2-211ENST00000531041 CES5AQ6NT32 575 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 SMRP1Q8NCR6 262 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 STKLD1Q8NE28 680 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 OLIG1Q8TAK6 271 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 LRRC3Q9BY71 257 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 PIDD1Q9HB75 910 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 ARHGAP20Q9P2F6 1191 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 DNMT3BQ9UBC3 853 aaKnown RBP17.86■□□□□ 0.45
SF3B2-211ENST00000531041 CYTH4Q9UIA0 394 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 CD207Q9UJ71 328 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 COG5Q9UP83 839 aa17.86■□□□□ 0.45
SF3B2-211ENST00000531041 DOCK8Q8NF50 2099 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 FAM92AA1XBS5 289 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 GOLGA6L6A8MZA4 724 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 KIF11P52732 1056 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 CDK17Q00537 523 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 GPRIN1Q7Z2K8 1008 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 LEMD2Q8NC56 503 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 C1orf131Q8NDD1 294 aaKnown RBP17.85■□□□□ 0.45
SF3B2-211ENST00000531041 SCAMP5Q8TAC9 235 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 FEZF2Q8TBJ5 459 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 ANP32BQ92688 251 aaKnown RBP17.85■□□□□ 0.45
SF3B2-211ENST00000531041 NOX5Q96PH1 765 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 PANX2Q96RD6 677 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 PCDHB18PQ96TA0 734 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 APOL5Q9BWW9 433 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 SLC4A5Q9BY07 1137 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 FBXO44Q9H4M3 255 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 AVENQ9NQS1 362 aaPredicted RBP17.85■□□□□ 0.45
SF3B2-211ENST00000531041 HCFC1R1Q9NWW0 138 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 UXTQ9UBK9 157 aaPredicted RBP17.85■□□□□ 0.45
SF3B2-211ENST00000531041 USP3Q9Y6I4 520 aa17.85■□□□□ 0.45
SF3B2-211ENST00000531041 GABBR2O75899 941 aa17.84■□□□□ 0.45
SF3B2-211ENST00000531041 PLEKP08567 350 aaPredicted RBP17.84■□□□□ 0.45
SF3B2-211ENST00000531041 UNGP13051 313 aaPredicted RBP17.84■□□□□ 0.45
SF3B2-211ENST00000531041 KCNA5P22460 613 aa17.84■□□□□ 0.45
SF3B2-211ENST00000531041 ACADSBP45954 432 aa17.84■□□□□ 0.45
SF3B2-211ENST00000531041 USP46P62068 366 aa17.84■□□□□ 0.45
SF3B2-211ENST00000531041 PDCLQ13371 301 aa17.84■□□□□ 0.45
SF3B2-211ENST00000531041 CLEC16AQ2KHT3 1053 aa17.84■□□□□ 0.45
SF3B2-211ENST00000531041 GRASPQ7Z6J2 395 aaPredicted RBP17.84■□□□□ 0.45
SF3B2-211ENST00000531041 TMEM110Q86TL2 294 aa17.84■□□□□ 0.45
SF3B2-211ENST00000531041 TMC8Q8IU68 726 aa17.84■□□□□ 0.45
SF3B2-211ENST00000531041 SLC30A5Q8TAD4 765 aa17.84■□□□□ 0.45
SF3B2-211ENST00000531041 CORO1BQ9BR76 489 aa17.84■□□□□ 0.45
SF3B2-211ENST00000531041 LRRC4Q9HBW1 653 aa17.84■□□□□ 0.45
SF3B2-211ENST00000531041 ASAH2Q9NR71 780 aa17.84■□□□□ 0.45
SF3B2-211ENST00000531041 MAGED2Q9UNF1 606 aaPredicted RBP17.84■□□□□ 0.45
SF3B2-211ENST00000531041 PRUNE2Q8WUY3 3088 aa17.84■□□□□ 0.45
SF3B2-211ENST00000531041 NUP210Q8TEM1 1887 aaPredicted RBP17.83■□□□□ 0.45
SF3B2-211ENST00000531041 SSU72P8A0A1W2PR75 194 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 H3BQ06 376 aaPredicted RBP17.83■□□□□ 0.45
SF3B2-211ENST00000531041 RHOP08100 348 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 YWHAQP27348 245 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 MTHFRP42898 656 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 RGS7P49802 495 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 TKTL1P51854 596 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 GSDMDP57764 484 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 MAPK8IP2Q13387 824 aaPredicted RBP17.83■□□□□ 0.45
SF3B2-211ENST00000531041 PABPC1LQ4VXU2 614 aaKnown RBP17.83■□□□□ 0.45
SF3B2-211ENST00000531041 ATAT1Q5SQI0 421 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 NAA35Q5VZE5 725 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 PM20D1Q6GTS8 502 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 VPS36Q86VN1 386 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 HS6ST3Q8IZP7 471 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 SCML4Q8N228 414 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 PPP1R13BQ96KQ4 1090 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 RIPOR3Q96MK2 946 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 CPXM1Q96SM3 734 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 CHP1Q99653 195 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 ZNF334Q9HCZ1 680 aaPredicted RBP17.83■□□□□ 0.45
SF3B2-211ENST00000531041 ST7Q9NRC1 585 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 SEPT11Q9NVA2 429 aaKnown RBP17.83■□□□□ 0.45
SF3B2-211ENST00000531041 SCML2Q9UQR0 700 aa17.83■□□□□ 0.45
SF3B2-211ENST00000531041 HELZP42694 1942 aaKnown RBP17.83■□□□□ 0.45
SF3B2-211ENST00000531041 DDX3XO00571 662 aaKnown RBP eCLIP17.82■□□□□ 0.443e-10■■■□□ 15.4
SF3B2-211ENST00000531041 FGF19O95750 216 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 GZMAP12544 262 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 FECHP22830 423 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 EIF4A3P38919 411 aaKnown RBP17.82■□□□□ 0.44
SF3B2-211ENST00000531041 SNX16P57768 344 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 CENPCQ03188 943 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 ADIGQ0VDE8 80 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 CLUL1Q15846 466 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 CYP4A22Q5TCH4 519 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 CCDC186Q7Z3E2 898 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 CPA5Q8WXQ8 436 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms