RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 IRX2Q9BZI1 471 aaPredicted RBP11.23□□□□□ -0.61
SOX6-213ENST00000530378 TRIM7Q9C029 511 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 OSGEPQ9NPF4 335 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 LUC7LQ9NQ29 371 aaKnown RBP11.23□□□□□ -0.61
SOX6-213ENST00000530378 CTTNBP2NLQ9P2B4 639 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 SALL4Q9UJQ4 1053 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 MTCL1Q9Y4B5 1905 aaKnown RBP11.23□□□□□ -0.61
SOX6-213ENST00000530378 C5orf42Q9H799 3197 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 ANKRD62A6NC57 917 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 TMEM110-MUSTN1A8MSY1 372 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 FSCN2O14926 492 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 ZSCAN12O43309 604 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 TGM5O43548 720 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 ADH1AP07327 375 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 ATF6P18850 670 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 MSNP26038 577 aaKnown RBP11.22□□□□□ -0.61
SOX6-213ENST00000530378 TKTL1P51854 596 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 RNASE9P60153 205 aaKnown RBP11.22□□□□□ -0.61
SOX6-213ENST00000530378 SMAD3P84022 425 aaKnown RBP11.22□□□□□ -0.61
SOX6-213ENST00000530378 UBE3AQ05086 875 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 KIF5AQ12840 1032 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 RAB33AQ14088 237 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 TAF5Q15542 800 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 CFAP221Q4G0U5 840 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 FAM102AQ5T9C2 384 aaPredicted RBP11.22□□□□□ -0.61
SOX6-213ENST00000530378 DNAJC24Q6P3W2 148 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 ZSCAN30Q86W11 494 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 XYLT1Q86Y38 959 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 MRPL43Q8N983 215 aaKnown RBP11.22□□□□□ -0.61
SOX6-213ENST00000530378 SPPL2BQ8TCT7 592 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 C18orf8Q96DM3 657 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 FAM161BQ96MY7 647 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 NUP85Q9BW27 656 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 EMILIN2Q9BXX0 1053 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 ULBP1Q9BZM6 244 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 GOLPH3Q9H4A6 298 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 LRRC4Q9HBW1 653 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 RXFP1Q9HBX9 757 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 METTL5Q9NRN9 209 aaKnown RBP11.22□□□□□ -0.61
SOX6-213ENST00000530378 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.22□□□□□ -0.61
SOX6-213ENST00000530378 AFF4Q9UHB7 1163 aaKnown RBP11.22□□□□□ -0.61
SOX6-213ENST00000530378 COG5Q9UP83 839 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 YIPF1Q9Y548 306 aa11.22□□□□□ -0.61
SOX6-213ENST00000530378 NCANO14594 1321 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 HHLA1C9JL84 531 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 SOX1O00570 391 aaPredicted RBP11.21□□□□□ -0.61
SOX6-213ENST00000530378 PAPSS1O43252 624 aaPredicted RBP11.21□□□□□ -0.61
SOX6-213ENST00000530378 ABLIM3O94929 683 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 MOCS3O95396 460 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 CALB1P05937 261 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 USP17L7P0C7H9 530 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 TMEM253P0C7T8 217 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 HAPLN1P10915 354 aaPredicted RBP11.21□□□□□ -0.61
SOX6-213ENST00000530378 EPCAMP16422 314 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 GTF2F1P35269 517 aaKnown RBP eCLIP11.21□□□□□ -0.61
SOX6-213ENST00000530378 NOP2P46087 812 aaKnown RBP11.21□□□□□ -0.61
SOX6-213ENST00000530378 SLC5A3P53794 718 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 USP46P62068 366 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 CREMQ03060 361 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 LIN9Q5TKA1 542 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 EMC1Q8N766 993 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 MSANTD4Q8NCY6 345 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 ZNF461Q8TAF7 563 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 SLC7A14Q8TBB6 771 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 FUBP3Q96I24 572 aaKnown RBP eCLIP11.21□□□□□ -0.61
SOX6-213ENST00000530378 MCEEQ96PE7 176 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 SLC4A5Q9BY07 1137 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 FNIP2Q9P278 1114 aa11.21□□□□□ -0.61
SOX6-213ENST00000530378 MAGED2Q9UNF1 606 aaPredicted RBP11.21□□□□□ -0.61
SOX6-213ENST00000530378 XIRP2A4UGR9 3374 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 TRIM66O15016 1216 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 GLUD1P00367 558 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 ATF2P15336 505 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 ELF1P32519 619 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 RPL7AP62424 266 aaKnown RBP11.21□□□□□ -0.62
SOX6-213ENST00000530378 GPC5P78333 572 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 TWF1Q12792 350 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 ZNF697Q5TEC3 545 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 DAB2IPQ5VWQ8 1189 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 CPNE8Q86YQ8 564 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 SLC35G2Q8TBE7 412 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 FEZF2Q8TBJ5 459 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 ZNF564Q8TBZ8 553 aaPredicted RBP11.21□□□□□ -0.62
SOX6-213ENST00000530378 LRCH3Q96II8 777 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 OXCT2Q9BYC2 517 aaPredicted RBP11.21□□□□□ -0.62
SOX6-213ENST00000530378 PRDM12Q9H4Q4 367 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 ZNF576Q9H609 170 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 CSNK1G1Q9HCP0 422 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 NGRNQ9NPE2 291 aaKnown RBP11.21□□□□□ -0.62
SOX6-213ENST00000530378 STK39Q9UEW8 545 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 SSX2IPQ9Y2D8 614 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 INSL5Q9Y5Q6 135 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 CAPN6Q9Y6Q1 641 aa11.21□□□□□ -0.62
SOX6-213ENST00000530378 SPTBN5Q9NRC6 3674 aaKnown RBP11.21□□□□□ -0.62
SOX6-213ENST00000530378 BRWD1Q9NSI6 2320 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 PJA2O43164 708 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 CLASP2O75122 1294 aaKnown RBP11.2□□□□□ -0.62
SOX6-213ENST00000530378 MAGEA11P43364 429 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 NRIP1P48552 1158 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 C10orf76Q5T2E6 689 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms