RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 CPQQ9Y646 472 aa17.16■□□□□ 0.34
COL16A1-216ENST00000529928 IGF2RP11717 2491 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 SPEGQ15772 3267 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 A0A0A0MRY4 1105 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 GOLGA8IPA6NC78 632 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 ZNF840PA6NDX5 716 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 GOLGA8JA6NMD2 632 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 UPK3BL1B0FP48 263 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 UPK3BL2E5RIL1 263 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 HYAL3O43820 417 aaPredicted RBP17.15■□□□□ 0.34
COL16A1-216ENST00000529928 LMO2P25791 158 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 GRIA2P42262 883 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 TNFRSF4P43489 277 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 KIR2DL1P43626 348 aaPredicted RBP17.15■□□□□ 0.34
COL16A1-216ENST00000529928 PEAR1Q5VY43 1037 aaPredicted RBP17.15■□□□□ 0.34
COL16A1-216ENST00000529928 KIAA1211LQ6NV74 962 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 DDX42Q86XP3 938 aaKnown RBP eCLIP17.15■□□□□ 0.34
COL16A1-216ENST00000529928 NOC3LQ8WTT2 800 aaKnown RBP17.15■□□□□ 0.34
COL16A1-216ENST00000529928 HMGB4Q8WW32 186 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 PCED1BQ96HM7 432 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 EPSTI1Q96J88 318 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 TMX3Q96JJ7 454 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 CBWD1Q9BRT8 395 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 RNF38Q9H0F5 515 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 PILRBQ9UKJ0 227 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 MSRB2Q9Y3D2 182 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 ATRXP46100 2492 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 BAHCC1Q9P281 2608 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 ASPMQ8IZT6 3477 aa17.15■□□□□ 0.34
COL16A1-216ENST00000529928 TNRC6BQ9UPQ9 1833 aaKnown RBP17.14■□□□□ 0.34
COL16A1-216ENST00000529928 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.14■□□□□ 0.33
COL16A1-216ENST00000529928 KIAA0391O15091 583 aaKnown RBP17.14■□□□□ 0.33
COL16A1-216ENST00000529928 OAS1P00973 400 aaKnown RBP17.14■□□□□ 0.33
COL16A1-216ENST00000529928 TNNC2P02585 160 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 CHRM1P11229 460 aaPredicted RBP17.14■□□□□ 0.33
COL16A1-216ENST00000529928 HOXB3P14651 431 aaPredicted RBP17.14■□□□□ 0.33
COL16A1-216ENST00000529928 WARSP23381 471 aaKnown RBP17.14■□□□□ 0.33
COL16A1-216ENST00000529928 RDXP35241 583 aaKnown RBP17.14■□□□□ 0.33
COL16A1-216ENST00000529928 SLC6A11P48066 632 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 CASP5P51878 434 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 ATXN3P54252 364 aaPredicted RBP17.14■□□□□ 0.33
COL16A1-216ENST00000529928 SIM1P81133 766 aaPredicted RBP17.14■□□□□ 0.33
COL16A1-216ENST00000529928 MESP2Q0VG99 397 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 SEMA3BQ13214 749 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 ACAP1Q15027 740 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 MAP7D1Q3KQU3 841 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 RHBDF2Q6PJF5 856 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 SV2BQ7L1I2 683 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 SFTPA1Q8IWL2 248 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 PGBD3Q8N328 593 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 GPD1LQ8N335 351 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 FRMD1Q8N878 549 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 CEP76Q8TAP6 659 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 MYCBPAPQ8TBZ2 947 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 DNAJC19Q96DA6 116 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 C8orf48Q96LL4 319 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 SLITRK1Q96PX8 696 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 PCIF1Q9H4Z3 704 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 ARHGEF4Q9NR80 690 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 INTS13Q9NVM9 706 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 SMPD4Q9NXE4 827 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 CFAP97Q9P2B7 532 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 TBC1D14Q9P2M4 693 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 MBD1Q9UIS9 605 aaPredicted RBP17.14■□□□□ 0.33
COL16A1-216ENST00000529928 ZZEF1O43149 2961 aa17.14■□□□□ 0.33
COL16A1-216ENST00000529928 ASCC3Q8N3C0 2202 aaKnown RBP17.13■□□□□ 0.33
COL16A1-216ENST00000529928 TCRBV21S2A2A0A5A6 115 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 F8VP50 259 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 H0Y626 953 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 AP5Z1O43299 807 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 TRIM16O95361 564 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 ABL1P00519 1130 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 CFIP05156 583 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 PDGFRBP09619 1106 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 ADH5P11766 374 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 SURF1Q15526 300 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 DUOXA1Q1HG43 343 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 EMC10Q5UCC4 262 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 TDRD10Q5VZ19 366 aaKnown RBP17.13■□□□□ 0.33
COL16A1-216ENST00000529928 LARP1BQ659C4 914 aaKnown RBP17.13■□□□□ 0.33
COL16A1-216ENST00000529928 USP49Q70CQ1 688 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 RABEPKQ7Z6M1 372 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 PIP4P1Q86T03 277 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 C12orf40Q86WS4 652 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 HDDC3Q8N4P3 179 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 MMS19Q96T76 1030 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 UPF2Q9HAU5 1272 aaKnown RBP17.13■□□□□ 0.33
COL16A1-216ENST00000529928 KLK13Q9UKR3 277 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 SLC6A14Q9UN76 642 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 SMC3Q9UQE7 1217 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 ATXN2Q99700 1313 aaKnown RBP17.13■□□□□ 0.33
COL16A1-216ENST00000529928 PLXND1Q9Y4D7 1925 aa17.13■□□□□ 0.33
COL16A1-216ENST00000529928 SPAARA0A1B0GVQ0 90 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 SCAMP3O14828 347 aaKnown RBP17.12■□□□□ 0.33
COL16A1-216ENST00000529928 ADAM23O75077 832 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 IDEP14735 1019 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 ITPKAP23677 461 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 TXLNAP40222 546 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 KDSRQ06136 332 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 GFPT1Q06210 699 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms