RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 NDST1P52848 882 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 CSTF1Q05048 431 aaKnown RBP10.19□□□□□ -0.78
CHD7-208ENST00000528280 CETN1Q12798 172 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 GRSF1Q12849 480 aaKnown RBP eCLIP10.19□□□□□ -0.78
CHD7-208ENST00000528280 C1orf220Q5T0J3 134 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 FOXR2Q6PJQ5 311 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 ACOT1Q86TX2 421 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 ZNF687Q8N1G0 1237 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 SPEM1Q8N4L4 309 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 CPA6Q8N4T0 437 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 FBXL13Q8NEE6 735 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 ATP2A3Q93084 1043 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 COL26A1Q96A83 441 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 CYP2S1Q96SQ9 504 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 DPEP3Q9H4B8 488 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 SMYD3Q9H7B4 428 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 DMAP1Q9NPF5 467 aaPredicted RBP10.19□□□□□ -0.78
CHD7-208ENST00000528280 RAB20Q9NX57 234 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 ZSCAN32Q9NX65 697 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 DUS2Q9NX74 493 aaKnown RBP10.19□□□□□ -0.78
CHD7-208ENST00000528280 GTSE1Q9NYZ3 720 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 GCNT4Q9P109 453 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 ARHGAP26Q9UNA1 814 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 NCANO14594 1321 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 BICDL2A1A5D9 508 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 TRDMT1O14717 391 aaKnown RBP10.18□□□□□ -0.78
CHD7-208ENST00000528280 LRRN2O75325 713 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 AP1G2O75843 785 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 FGFR1OPO95684 399 aaKnown RBP10.18□□□□□ -0.78
CHD7-208ENST00000528280 ABL1P00519 1130 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 DRD1P21728 446 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 SLC8A3P57103 927 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 YWHAEP62258 255 aaKnown RBP10.18□□□□□ -0.78
CHD7-208ENST00000528280 SLC7A9P82251 487 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 PPP3CAQ08209 521 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 INCA1Q0VD86 236 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 TAF10Q12962 218 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 MTAPQ13126 283 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 MTF1Q14872 753 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 RSPO4Q2I0M5 234 aaPredicted RBP10.18□□□□□ -0.78
CHD7-208ENST00000528280 FBXO43Q4G163 708 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 SNX30Q5VWJ9 437 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 ANKRD40Q6AI12 368 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 FILIP1Q7Z7B0 1213 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 ARL14EPQ8N8R7 260 aaPredicted RBP10.18□□□□□ -0.78
CHD7-208ENST00000528280 OSCP1Q8WVF1 389 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 SECISBP2LQ93073 1101 aaKnown RBP10.18□□□□□ -0.78
CHD7-208ENST00000528280 CYFIP2Q96F07 1278 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 ZFYVE19Q96K21 471 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 CEP63Q96MT8 703 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 HNRNPABQ99729 332 aaKnown RBP10.18□□□□□ -0.78
CHD7-208ENST00000528280 ZNF518BQ9C0D4 1074 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 NIF3L1Q9GZT8 377 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 SMG9Q9H0W8 520 aaKnown RBP10.18□□□□□ -0.78
CHD7-208ENST00000528280 CSNK1G1Q9HCP0 422 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 IL37Q9NZH6 218 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 CHMP5Q9NZZ3 219 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 TBC1D14Q9P2M4 693 aa10.18□□□□□ -0.78
CHD7-208ENST00000528280 ARMCX3Q9UH62 379 aaPredicted RBP10.18□□□□□ -0.78
CHD7-208ENST00000528280 MIA3Q5JRA6 1907 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 NUP210Q8TEM1 1887 aaPredicted RBP10.17□□□□□ -0.78
CHD7-208ENST00000528280 ANKRD11Q6UB99 2663 aaPredicted RBP10.17□□□□□ -0.78
CHD7-208ENST00000528280 SHISA7A6NL88 538 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 CLDN5O00501 218 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 NFATC1O95644 943 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 GNA14O95837 355 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 FAM200BP0CF97 657 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 TRIM49P0CI25 452 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 TRIM49CP0CI26 452 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 CNR2P34972 360 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 ASPAP45381 313 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 RAP1GAPP47736 663 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 MXI1P50539 228 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 TUBP50607 506 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 ZNF77Q15935 545 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 PREPLQ4J6C6 727 aaPredicted RBP10.17□□□□□ -0.78
CHD7-208ENST00000528280 HECTD3Q5T447 861 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 TCERG1LQ5VWI1 586 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 SCARA5Q6ZMJ2 495 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 PAQR9Q6ZVX9 377 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 TADA2BQ86TJ2 420 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 FAM35AQ86V20 835 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 ZC3H3Q8IXZ2 948 aaKnown RBP10.17□□□□□ -0.78
CHD7-208ENST00000528280 SMYD4Q8IYR2 804 aaPredicted RBP10.17□□□□□ -0.78
CHD7-208ENST00000528280 MAML2Q8IZL2 1156 aaPredicted RBP10.17□□□□□ -0.78
CHD7-208ENST00000528280 FUKQ8N0W3 1084 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 GPR161Q8N6U8 529 aaKnown RBP10.17□□□□□ -0.78
CHD7-208ENST00000528280 SLC2A14Q8TDB8 520 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 TAS1R2Q8TE23 839 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 SH3RF2Q8TEC5 729 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 NELL1Q92832 810 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 FBXO32Q969P5 355 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 OTUB2Q96DC9 234 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 HEXIM2Q96MH2 286 aaKnown RBP10.17□□□□□ -0.78
CHD7-208ENST00000528280 KCNK16Q96T55 309 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 UBXN6Q9BZV1 441 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 SDCBP2Q9H190 292 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 EBF3Q9H4W6 596 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 ECT2Q9H8V3 914 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 PNPLA8Q9NP80 782 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms