RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 PEBP4Q96S96 227 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 ADAMTS10Q9H324 1103 aa16.06■□□□□ 0.16
USH1C-207ENST00000527720 PSMC3IPQ9P2W1 217 aaPredicted RBP16.06■□□□□ 0.16
USH1C-207ENST00000527720 ZMYND8Q9ULU4 1186 aaPredicted RBP16.06■□□□□ 0.16
USH1C-207ENST00000527720 CCL15-CCL14A0A0B4J2E2 113 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 IQCA1LA6NCM1 817 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 DNAJC8O75937 253 aaPredicted RBP16.05■□□□□ 0.16
USH1C-207ENST00000527720 SUN1O94901 812 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 NPTXRO95502 500 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 CDH6P55285 790 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 CBLBQ13191 982 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 ACVR2BQ13705 512 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 TAF5Q15542 800 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 ZBTB6Q15916 424 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 CCL15Q16663 113 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 GOLGA7BQ2TAP0 167 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 ZC3H12AQ5D1E8 599 aaKnown RBP16.05■□□□□ 0.16
USH1C-207ENST00000527720 FBXW10Q5XX13 1052 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 DPH6Q7L8W6 267 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 TRPM8Q7Z2W7 1104 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 UNC93AQ86WB7 457 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 UNC45BQ8IWX7 931 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 SPATA18Q8TC71 538 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 STK32AQ8WU08 396 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 PYROXD1Q8WU10 500 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 TGS1Q96RS0 853 aaKnown RBP16.05■□□□□ 0.16
USH1C-207ENST00000527720 TBCBQ99426 244 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 TINF2Q9BSI4 451 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 SLC4A5Q9BY07 1137 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 SSU72Q9NP77 194 aaKnown RBP16.05■□□□□ 0.16
USH1C-207ENST00000527720 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.05■□□□□ 0.16
USH1C-207ENST00000527720 FGFR1OP2Q9NVK5 253 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 POC1B-GALNT4F8VUJ3 575 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 HOXA11P31270 313 aaPredicted RBP16.05■□□□□ 0.16
USH1C-207ENST00000527720 YARSP54577 528 aaKnown RBP16.05■□□□□ 0.16
USH1C-207ENST00000527720 GEMIN4P57678 1058 aaKnown RBP16.05■□□□□ 0.16
USH1C-207ENST00000527720 ROR1Q01973 937 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 DPYSL3Q14195 570 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 TMEM110Q86TL2 294 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 PNMA8AQ86V59 439 aaPredicted RBP16.05■□□□□ 0.16
USH1C-207ENST00000527720 BEST2Q8NFU1 509 aa16.05■□□□□ 0.16
USH1C-207ENST00000527720 GLTPD2A6NH11 291 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 FOXO6A8MYZ6 492 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 ZNF487B1APH4 448 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 GPX6P59796 221 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 IRF5Q13568 498 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 SPRED3Q2MJR0 410 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 KLHL38Q2WGJ6 581 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 PPP1R26Q5T8A7 1209 aaPredicted RBP16.04■□□□□ 0.16
USH1C-207ENST00000527720 TRNP1Q6NT89 227 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 NOTUMQ6P988 496 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 OLFML1Q6UWY5 402 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 SESTD1Q86VW0 696 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 SUGP1Q8IWZ8 645 aaKnown RBP16.04■□□□□ 0.16
USH1C-207ENST00000527720 PDIK1LQ8N165 341 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 GDAP1Q8TB36 358 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 SMC6Q96SB8 1091 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 SYT17Q9BSW7 474 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 TRABDQ9H4I3 376 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 TMEM51Q9NW97 253 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 RABGEF1Q9UJ41 708 aa16.04■□□□□ 0.16
USH1C-207ENST00000527720 RASSF9O75901 435 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 KRT15P19012 456 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 TGM2P21980 687 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 HNRNPH1P31943 449 aaKnown RBP16.03■□□□□ 0.16
USH1C-207ENST00000527720 PSMC4P43686 418 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 SLC6A3Q01959 620 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 XRCC4Q13426 336 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 CCDC14Q49A88 953 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 ANKRD22Q5VYY1 191 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 CATSPER4Q7RTX7 472 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 GBP7Q8N8V2 638 aaPredicted RBP16.03■□□□□ 0.16
USH1C-207ENST00000527720 C12orf29Q8N999 325 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 FAM71DQ8N9W8 422 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 DENND1AQ8TEH3 1009 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 SLC35F5Q8WV83 523 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 BRI3BPQ8WY22 251 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 RNF157Q96PX1 679 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 TSPAN18Q96SJ8 248 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 ACSS3Q9H6R3 686 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 SNTG2Q9NY99 539 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 HESX1Q9UBX0 185 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 SLC12A4Q9UP95 1085 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 SNX9Q9Y5X1 595 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 CLUHO75153 1309 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 NRCAMQ92823 1304 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 CFAP69A5D8W1 941 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 GPR32O75388 356 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 CAPN15O75808 1086 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 ASMTLO95671 621 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 ATP2A2P16615 1042 aaKnown RBP16.03■□□□□ 0.16
USH1C-207ENST00000527720 AXLP30530 894 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 RNASELQ05823 741 aaKnown RBP16.03■□□□□ 0.16
USH1C-207ENST00000527720 FAM110CQ1W6H9 321 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 KIZQ2M2Z5 673 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 C15orf59Q2T9L4 293 aaPredicted RBP16.03■□□□□ 0.16
USH1C-207ENST00000527720 FNBP1LQ5T0N5 605 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 ARHGAP17Q68EM7 881 aa16.03■□□□□ 0.16
USH1C-207ENST00000527720 DARS2Q6PI48 645 aaKnown RBP16.03■□□□□ 0.16
USH1C-207ENST00000527720 RGS9BPQ6ZS82 235 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms