RNA–Protein interactions for RNA: ENST00000526988.1

BEST1-205, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-205ENST00000526988 NT5C1AQ9BXI3 368 aa17.23■□□□□ 0.35
BEST1-205ENST00000526988 DNAI2Q9GZS0 605 aa17.23■□□□□ 0.35
BEST1-205ENST00000526988 SEMA4AQ9H3S1 761 aa17.23■□□□□ 0.35
BEST1-205ENST00000526988 CHORDC1Q9UHD1 332 aaPredicted RBP17.23■□□□□ 0.35
BEST1-205ENST00000526988 ARHGAP26Q9UNA1 814 aa17.23■□□□□ 0.35
BEST1-205ENST00000526988 TICRRQ7Z2Z1 1910 aa17.23■□□□□ 0.35
BEST1-205ENST00000526988 OTOL1A6NHN0 477 aaPredicted RBP17.22■□□□□ 0.35
BEST1-205ENST00000526988 SLC16A3O15427 465 aaKnown RBP17.22■□□□□ 0.35
BEST1-205ENST00000526988 PFKLP17858 780 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 SLC5A3P53794 718 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 MAP3K7CLP57077 242 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 AMPD2Q01433 879 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 LRRC63Q05C16 580 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 USP4Q13107 963 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 WDR44Q5JSH3 913 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 KLHL10Q6JEL2 608 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 ELOA2Q8IYF1 753 aaPredicted RBP17.22■□□□□ 0.35
BEST1-205ENST00000526988 CPA6Q8N4T0 437 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 FBXL13Q8NEE6 735 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 PDZD8Q8NEN9 1154 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 OSCP1Q8WVF1 389 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 ATRIPQ8WXE1 791 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 DHTKD1Q96HY7 919 aaPredicted RBP17.22■□□□□ 0.35
BEST1-205ENST00000526988 TWNKQ96RR1 684 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 SMOQ99835 787 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 RNF38Q9H0F5 515 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 RAB20Q9NX57 234 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 SMPD4Q9NXE4 827 aa17.22■□□□□ 0.35
BEST1-205ENST00000526988 NUP210Q8TEM1 1887 aaPredicted RBP17.22■□□□□ 0.35
BEST1-205ENST00000526988 MIA3Q5JRA6 1907 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 F5P12259 2224 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 LEFTY2O00292 366 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 BIN1O00499 593 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 LMNAP02545 664 aaKnown RBP17.21■□□□□ 0.35
BEST1-205ENST00000526988 FAM200BP0CF97 657 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 CXCL12P48061 93 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 CCR3P51677 355 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 INCA1Q0VD86 236 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 GRSF1Q12849 480 aaKnown RBP eCLIP17.21■□□□□ 0.35
BEST1-205ENST00000526988 PPP2R5DQ14738 602 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 Q6ZS52 159 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 ATP2A3Q93084 1043 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 JAKMIP2Q96AA8 810 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 CYFIP2Q96F07 1278 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 LINC00597Q9H2U6 94 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 ECT2Q9H8V3 914 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 PRMT8Q9NR22 394 aaPredicted RBP17.21■□□□□ 0.35
BEST1-205ENST00000526988 ZSCAN32Q9NX65 697 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 ARMCX3Q9UH62 379 aaPredicted RBP17.21■□□□□ 0.35
BEST1-205ENST00000526988 CPQQ9Y646 472 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 COL4A2P08572 1712 aa17.21■□□□□ 0.35
BEST1-205ENST00000526988 TNFRSF10BO14763 440 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 CILPO75339 1184 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 BEST1O76090 585 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 MBL2P11226 248 aaPredicted RBP17.2■□□□□ 0.34
BEST1-205ENST00000526988 CD44P16070 742 aaKnown RBP17.2■□□□□ 0.34
BEST1-205ENST00000526988 PPP1R2P41236 205 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 MCCD1P59942 119 aaPredicted RBP17.2■□□□□ 0.34
BEST1-205ENST00000526988 SLC7A9P82251 487 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 SATB1Q01826 763 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 NR1H3Q13133 447 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 GAS6Q14393 721 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 CBWD6Q4V339 395 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 ZNF394Q53GI3 561 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 CBWD3Q5JTY5 395 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 CBWD5Q5RIA9 395 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 ZC3H3Q8IXZ2 948 aaKnown RBP17.2■□□□□ 0.34
BEST1-205ENST00000526988 SPEM1Q8N4L4 309 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 ZMIZ2Q8NF64 920 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 HEXIM2Q96MH2 286 aaKnown RBP17.2■□□□□ 0.34
BEST1-205ENST00000526988 HNRNPABQ99729 332 aaKnown RBP17.2■□□□□ 0.34
BEST1-205ENST00000526988 COMMD8Q9NX08 183 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 CHMP5Q9NZZ3 219 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 GMIPQ9P107 970 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 PCDHGA2Q9Y5H1 932 aa17.2■□□□□ 0.34
BEST1-205ENST00000526988 SCAMP3O14828 347 aaKnown RBP17.19■□□□□ 0.34
BEST1-205ENST00000526988 OAS1P00973 400 aaKnown RBP17.19■□□□□ 0.34
BEST1-205ENST00000526988 TCF3P15923 654 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 GJA4P35212 333 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 ZXDBP98169 803 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 EML3Q32P44 896 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 CCDC40Q4G0X9 1142 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 TMEM196Q5HYL7 178 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 HECTD3Q5T447 861 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 MAMSTRQ6ZN01 415 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 WHAMMQ8TF30 809 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 NELFBQ8WX92 580 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 OVCA2Q8WZ82 227 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 TATDN2Q93075 761 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 EXOC4Q96A65 974 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 P2RY13Q9BPV8 354 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 NACA2Q9H009 215 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 CSNK1G1Q9HCP0 422 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 CISHQ9NSE2 258 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 IL37Q9NZH6 218 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 CFAP97Q9P2B7 532 aa17.19■□□□□ 0.34
BEST1-205ENST00000526988 ZFHX2Q9C0A1 2572 aaPredicted RBP17.18■□□□□ 0.34
BEST1-205ENST00000526988 TRDMT1O14717 391 aaKnown RBP17.18■□□□□ 0.34
BEST1-205ENST00000526988 COCHO43405 550 aa17.18■□□□□ 0.34
BEST1-205ENST00000526988 NFATC1O95644 943 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms