RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 TTC8Q8TAM2 541 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 CYFIP2Q96F07 1278 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 SLITRK1Q96PX8 696 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 HNRNPABQ99729 332 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 SRRTQ9BXP5 876 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 CSNK1G1Q9HCP0 422 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 LMBRD1Q9NUN5 540 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 GTSE1Q9NYZ3 720 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 RWDD2AQ9UIY3 292 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 MRPS17Q9Y2R5 130 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 GNA14O95837 355 aa19.6■□□□□ 0.73
TSPAN4-215ENST00000525334 HDCP19113 662 aa19.6■□□□□ 0.73
TSPAN4-215ENST00000525334 SOX9P48436 509 aa19.6■□□□□ 0.73
TSPAN4-215ENST00000525334 KPNA1P52294 538 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-215ENST00000525334 MARSP56192 900 aaKnown RBP19.6■□□□□ 0.73
TSPAN4-215ENST00000525334 TNK2Q07912 1038 aa19.6■□□□□ 0.73
TSPAN4-215ENST00000525334 LRMPQ12912 555 aa19.6■□□□□ 0.73
TSPAN4-215ENST00000525334 CUL2Q13617 745 aa19.6■□□□□ 0.73
TSPAN4-215ENST00000525334 TRIM59Q8IWR1 403 aa19.6■□□□□ 0.73
TSPAN4-215ENST00000525334 FBXO32Q969P5 355 aa19.6■□□□□ 0.73
TSPAN4-215ENST00000525334 NELL2Q99435 816 aa19.6■□□□□ 0.73
TSPAN4-215ENST00000525334 DNAI2Q9GZS0 605 aa19.6■□□□□ 0.73
TSPAN4-215ENST00000525334 F5P12259 2224 aa19.6■□□□□ 0.73
TSPAN4-215ENST00000525334 PATJQ8NI35 1801 aa19.6■□□□□ 0.73
TSPAN4-215ENST00000525334 HELZP42694 1942 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 PMM2O15305 246 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 ABL1P00519 1130 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 PFKLP17858 780 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 PDE6CP51160 858 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 MLLT6P55198 1093 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 USP4Q13107 963 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 MTF1Q14872 753 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 ANGPT1Q15389 498 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 ZNF77Q15935 545 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 CLEC20AQ6ZU45 233 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 ZNF687Q8N1G0 1237 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 SLC4A11Q8NBS3 891 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 TTC16Q8NEE8 873 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 PDZD8Q8NEN9 1154 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 OVCA2Q8WZ82 227 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 FAM3CQ92520 227 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 MSANTD3Q96H12 275 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 IPO9Q96P70 1041 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 MED15Q96RN5 788 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 FAM83CQ9BQN1 747 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 NUP62CLQ9H1M0 184 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 FAM124BQ9H5Z6 455 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 C8orf33Q9H7E9 229 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 GKN1Q9NS71 199 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 IL37Q9NZH6 218 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 NDRG2Q9UN36 371 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 ARHGAP26Q9UNA1 814 aa19.59■□□□□ 0.73
TSPAN4-215ENST00000525334 MYH10P35580 1976 aa19.58■□□□□ 0.73
TSPAN4-215ENST00000525334 OLFM2O95897 454 aa19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 OAS1P00973 400 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 RAD23BP54727 409 aa19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 PPP1R26Q5T8A7 1209 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 TRIM68Q6AZZ1 485 aa19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 CC2D1AQ6P1N0 951 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 GPRIN1Q7Z2K8 1008 aa19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 MLKLQ8NB16 471 aa19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 SH3RF2Q8TEC5 729 aa19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 JAKMIP2Q96AA8 810 aa19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 TMEM176AQ96HP8 235 aa19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 HEXIM2Q96MH2 286 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 GBP4Q96PP9 640 aa19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 HPS4Q9NQG7 708 aa19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 COMMD8Q9NX08 183 aa19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 ZFHX2Q9C0A1 2572 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-215ENST00000525334 FAM92AA1XBS5 289 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 HHLA1C9JL84 531 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 PROB1E7EW31 1015 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 SPECC1L-ADORA2AF8WAN1 911 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 P4HA2O15460 535 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 FGFR1OPO95684 399 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 CCDC192P0DO97 292 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 CTHP32929 405 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 NBL1P41271 181 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 ZXDBP98169 803 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 KCNH2Q12809 1159 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 FZD5Q13467 585 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 ITPRIPL2Q3MIP1 535 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 TXNDC11Q6PKC3 985 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 CLDN23Q96B33 292 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 RNF38Q9H0F5 515 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 EBF3Q9H4W6 596 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 GMIPQ9P107 970 aa19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 CHORDC1Q9UHD1 332 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.57■□□□□ 0.72
TSPAN4-215ENST00000525334 NCAM2O15394 837 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 AFPP02771 609 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 ARSAP15289 507 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 TCF3P15923 654 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 TBXAS1P24557 533 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 MAGEA9P43362 315 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 YWHAEP62258 255 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 SLC7A9P82251 487 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 CETN1Q12798 172 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 RUNX3Q13761 415 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 DPCR1Q3MIW9 517 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms