RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 TMEM206Q9H813 350 aa8.99□□□□□ -0.97
DEPDC1-205ENST00000525124 HPS4Q9NQG7 708 aa8.99□□□□□ -0.97
DEPDC1-205ENST00000525124 GKN1Q9NS71 199 aa8.99□□□□□ -0.97
DEPDC1-205ENST00000525124 CCDC39Q9UFE4 941 aa8.99□□□□□ -0.97
DEPDC1-205ENST00000525124 EXOC7Q9UPT5 735 aa8.99□□□□□ -0.97
DEPDC1-205ENST00000525124 PCDHB11Q9Y5F2 797 aa8.99□□□□□ -0.97
DEPDC1-205ENST00000525124 PCDHGA5Q9Y5G8 931 aa8.99□□□□□ -0.97
DEPDC1-205ENST00000525124 SRPRBQ9Y5M8 271 aaKnown RBP8.99□□□□□ -0.97
DEPDC1-205ENST00000525124 FRMD3A2A2Y4 597 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 DCDC2BA2VCK2 349 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 SHISA8B8ZZ34 492 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 TISP43B9A030 160 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 KIAA0391O15091 583 aaKnown RBP8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 TADA3O75528 432 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 PFKLP17858 780 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 RPL10AP62906 217 aaKnown RBP8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 MYL7Q01449 175 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 FAM160A1Q05DH4 1040 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 TNK2Q07912 1038 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 GRSF1Q12849 480 aaKnown RBP eCLIP8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 PDGFRLQ15198 375 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 TAF12Q16514 161 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 LPAL2Q16609 132 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 CFAP221Q4G0U5 840 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 FSTL4Q6MZW2 842 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 CACNA2D4Q7Z3S7 1137 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 LIMS2Q7Z4I7 341 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 SFR1Q86XK3 245 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 PDCL2Q8N4E4 241 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 MAB21L3Q8N8X9 362 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 C1orf127Q8N9H9 656 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 CXorf38Q8TB03 319 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 GIPC2Q8TF65 315 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 MRPS31Q92665 395 aaKnown RBP8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 USP13Q92995 863 aaPredicted RBP8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 ACCSQ96QU6 501 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 PKMYT1Q99640 499 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 ZHX3Q9H4I2 956 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 RAB6BQ9NRW1 208 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 TMLHEQ9NVH6 421 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 C2orf42Q9NWW7 574 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 ABI2Q9NYB9 513 aaPredicted RBP8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 ITGA11Q9UKX5 1188 aa8.98□□□□□ -0.97
DEPDC1-205ENST00000525124 MYO18AQ92614 2054 aaKnown RBP8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 GABRDO14764 452 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 TM4SF5O14894 197 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 HUS1O60921 280 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 ITGB3P05106 788 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 MAGEA11P43364 429 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 MAP2K3P46734 347 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 LHX1P48742 406 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 MCCD1P59942 119 aaPredicted RBP8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 BFSP1Q12934 665 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 USP4Q13107 963 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 NR1H3Q13133 447 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 SRSF5Q13243 272 aaKnown RBP8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 CUL4AQ13619 759 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 UBAP2LQ14157 1087 aaKnown RBP8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 ZNF77Q15935 545 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 PPM1JQ5JR12 505 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 FAM171BQ6P995 826 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 CEP68Q76N32 757 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 SV2BQ7L1I2 683 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 SYT13Q7L8C5 426 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 TOP6BLQ8N6T0 577 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 GALNT6Q8NCL4 622 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 RASSF8Q8NHQ8 419 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 CCDC26Q8TAB7 109 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 OSCP1Q8WVF1 389 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 EPSTI1Q96J88 318 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 MRPL44Q9H9J2 332 aaKnown RBP8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 DDX43Q9NXZ2 648 aaKnown RBP8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 EBF1Q9UH73 591 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 FBXO2Q9UK22 296 aaPredicted RBP8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 L1RE1Q9UN81 338 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 CCL26Q9Y258 94 aa8.97□□□□□ -0.97
DEPDC1-205ENST00000525124 PI4KAP42356 2102 aa8.96□□□□□ -0.97
DEPDC1-205ENST00000525124 NCOR2Q9Y618 2525 aa8.96□□□□□ -0.97
DEPDC1-205ENST00000525124 OTOL1A6NHN0 477 aaPredicted RBP8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 MYMKA6NI61 221 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 EXTL3O43909 919 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 PRPF40AO75400 957 aaKnown RBP8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 RPP40O75818 363 aaKnown RBP8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 IL2RAP01589 272 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 FAM163BP0C2L3 166 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 USP17L7P0C7H9 530 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 PDCP20941 246 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 PCSK1P29120 753 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 POLR2BP30876 1174 aaKnown RBP8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 GJA4P35212 333 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 TXLNAP40222 546 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 PDE6CP51160 858 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 CENPCQ03188 943 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 MTF1Q14872 753 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 SURF1Q15526 300 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 RRAGBQ5VZM2 374 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 TXNDC8Q6A555 127 aa8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 HEATR6Q6AI08 1181 aaKnown RBP8.96□□□□□ -0.98
DEPDC1-205ENST00000525124 CC2D1AQ6P1N0 951 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms