RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 ALDH1A3P47895 512 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 RPL34P49207 117 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 CLCN4P51793 760 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 TKTL1P51854 596 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 ARHGAP29Q52LW3 1261 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 SDHAF4Q5VUM1 108 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 DNAJC24Q6P3W2 148 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 SPATA31D4Q6ZUB0 917 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 GPRIN1Q7Z2K8 1008 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 PHLDB2Q86SQ0 1253 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 KIAA1524Q8TCG1 905 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 MRPL38Q96DV4 380 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 TRMT1Q9NXH9 659 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 CHD7Q9P2D1 2997 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 WDR35Q9P2L0 1181 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 FBXW11Q9UKB1 542 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 SCINQ9Y6U3 715 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 NCANO14594 1321 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 MYH10P35580 1976 aa16.68■□□□□ 0.26
TSPAN4-213ENST00000524895 RCCD1A6NED2 376 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 GOLGA8SH3BPF8 625 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 PJA2O43164 708 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 KRT86O43790 486 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 CLASP2O75122 1294 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 SLC5A3P53794 718 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 IFRD2Q12894 506 aaPredicted RBP16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 PLD1Q13393 1074 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 RAB41Q5JT25 222 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 OR6B2Q6IFH4 312 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 LILRA6Q6PI73 481 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 CCDC149Q6ZUS6 474 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 FAM183BPQ6ZVS7 135 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 XYLT1Q86Y38 959 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 ZDHHC17Q8IUH5 632 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 CCAR2Q8N163 923 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 NUP93Q8N1F7 819 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 KREMEN2Q8NCW0 462 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 SLC7A14Q8TBB6 771 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 PPP2R3CQ969Q6 453 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 ARHGEF26Q96DR7 871 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 SPATA17Q96L03 361 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 CEP295NLQ96MC4 621 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 LACRTQ9GZZ8 138 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 LZTFL1Q9NQ48 299 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 AVENQ9NQS1 362 aaPredicted RBP16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 CTTNBP2NLQ9P2B4 639 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 INSL5Q9Y5Q6 135 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 PLXNA3P51805 1871 aa16.67■□□□□ 0.26
TSPAN4-213ENST00000524895 A0A0U1RQJ8 604 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 GOLGA6L9A6NEM1 432 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 PAPSS1O43252 624 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 GABBR2O75899 941 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 FBXO21O94952 628 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 C1RP00736 705 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 CYP1A2P05177 515 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 C8AP07357 584 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 ATF6P18850 670 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 GSCP56915 257 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 TWF1Q12792 350 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 ZNF268Q14587 947 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 VEPH1Q14D04 833 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 FAM102AQ5T9C2 384 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 LLGL2Q6P1M3 1020 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 ELMSAN1Q6PJG2 1045 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 DENND5BQ6ZUT9 1274 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 ADGRD2Q7Z7M1 963 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 RBM23Q86U06 439 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 ZSCAN30Q86W11 494 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 SCUBE3Q8IX30 993 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 RHOT2Q8IXI1 618 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 C3orf20Q8ND61 904 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 GPR152Q8TDT2 470 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 GIPC2Q8TF65 315 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 ATRIPQ8WXE1 791 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 RFFLQ8WZ73 363 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 SELENOOQ9BVL4 669 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 ULBP1Q9BZM6 244 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 TLE6Q9H808 572 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 MRPL47Q9HD33 250 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 CNGB3Q9NQW8 809 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 PARVAQ9NVD7 372 aa16.66■□□□□ 0.26
TSPAN4-213ENST00000524895 LAMA3Q16787 3333 aa16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 ATG2AQ2TAZ0 1938 aa16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 USP27XA6NNY8 438 aa16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 TNFRSF10BO14763 440 aa16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 PER2O15055 1255 aa16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 SART1O43290 800 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 RTN3O95197 1032 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 ZBED1O96006 694 aa16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 LRG1P02750 347 aa16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 MSNP26038 577 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 NRIP1P48552 1158 aa16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 EPHB3P54753 998 aa16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 PLEKHA7Q6IQ23 1121 aa16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 OLFML1Q6UWY5 402 aa16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 ZNF662Q6ZS27 426 aa16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 C17orf53Q8N3J3 647 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 STKLD1Q8NE28 680 aa16.65■□□□□ 0.26
TSPAN4-213ENST00000524895 SCAMP5Q8TAC9 235 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms