RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CRKLP46109 303 aaKnown RBP3.7□□□□□ -1.82
CSDE1-208ENST00000524652 ITIH3Q06033 890 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 FLYWCH1Q4VC44 716 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 KIAA1614Q5VZ46 1190 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 PPP4R3AQ6IN85 833 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 G2E3Q7L622 706 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 TTC5Q8N0Z6 440 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 CFAP52Q8N1V2 620 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 CBARPQ8N350 705 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-208ENST00000524652 AOPEPQ8N6M6 819 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 TOR1AIP2Q8NFQ8 470 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 MYCBPAPQ8TBZ2 947 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 HASPINQ8TF76 798 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 JADE3Q92613 823 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 RAB24Q969Q5 203 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 MRGPRX4Q96LA9 322 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 CPNE5Q9HCH3 593 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 IL17RBQ9NRM6 502 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 BABAM1Q9NWV8 329 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 MKS1Q9NXB0 559 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 SLC5A4Q9NY91 659 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 CALCOCO1Q9P1Z2 691 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 TNNQ9UQP3 1299 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 IPPQ9Y573 584 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 PCDHA13Q9Y5I0 950 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 CCDC88AQ3V6T2 1871 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 COL15A1P39059 1388 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 WDR27A2RRH5 827 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 DNAJC9-AS1A6NH13 148 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 ADM5C9JUS6 153 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 HTRA2O43464 458 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-208ENST00000524652 RPLP2P05387 115 aaKnown RBP3.69□□□□□ -1.82
CSDE1-208ENST00000524652 PPP3CBP16298 524 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 EIF2S2P20042 333 aaKnown RBP3.69□□□□□ -1.82
CSDE1-208ENST00000524652 C5AR1P21730 350 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 ITPKBP27987 946 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 IARSP41252 1262 aaKnown RBP3.69□□□□□ -1.82
CSDE1-208ENST00000524652 EIF5P55010 431 aaKnown RBP3.69□□□□□ -1.82
CSDE1-208ENST00000524652 NXPH1P58417 271 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 ZNF280AP59817 542 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-208ENST00000524652 TLE1Q04724 770 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 SLC15A2Q16348 729 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 TWISTNBQ3B726 338 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-208ENST00000524652 PGM2L1Q6PCE3 622 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 C1QL2Q7Z5L3 287 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 PDSS2Q86YH6 399 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 NGEFQ8N5V2 710 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 PDPRQ8NCN5 879 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 B3GALNT2Q8NCR0 500 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 TMIEQ8NEW7 156 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 SMG7Q92540 1137 aaKnown RBP3.69□□□□□ -1.82
CSDE1-208ENST00000524652 C1QTNF7Q9BXJ2 289 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 KLC4Q9NSK0 619 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 CHPF2Q9P2E5 772 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 WNT6Q9Y6F9 365 aa3.69□□□□□ -1.82
CSDE1-208ENST00000524652 SOS1Q07889 1333 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-208ENST00000524652 ADCY9O60503 1353 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 KLHL33A6NCF5 533 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 BCAR3O75815 825 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 CAMTA2O94983 1202 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 HOXB7P09629 217 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 ELFN1P0C7U0 828 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 MYL6BP14649 208 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 RARSP54136 660 aaKnown RBP3.68□□□□□ -1.82
CSDE1-208ENST00000524652 MC2RQ01718 297 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 CALD1Q05682 793 aaKnown RBP3.68□□□□□ -1.82
CSDE1-208ENST00000524652 HLFQ16534 295 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 TSTD2Q5T7W7 516 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 FCRLBQ6BAA4 426 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 TAPT1Q6NXT6 567 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 GADL1Q6ZQY3 521 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 TSHZ1Q6ZSZ6 1077 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 COL23A1Q86Y22 540 aaPredicted RBP3.68□□□□□ -1.82
CSDE1-208ENST00000524652 FAXDC2Q96IV6 333 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 PBKQ96KB5 322 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 SMOQ99835 787 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 ALG8Q9BVK2 526 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 IMPG2Q9BZV3 1241 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 MYH16Q9H6N6 1097 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 MAN1C1Q9NR34 630 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 RLIMQ9NVW2 624 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 SIDT1Q9NXL6 827 aaKnown RBP3.68□□□□□ -1.82
CSDE1-208ENST00000524652 SRP68Q9UHB9 627 aaKnown RBP3.68□□□□□ -1.82
CSDE1-208ENST00000524652 LIMCH1Q9UPQ0 1083 aa3.68□□□□□ -1.82
CSDE1-208ENST00000524652 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.68□□□□□ -1.82
CSDE1-208ENST00000524652 USP42Q9H9J4 1324 aaKnown RBP3.68□□□□□ -1.82
CSDE1-208ENST00000524652 ARFGEF1Q9Y6D6 1849 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 LINC00473A8K010 186 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 URI1O94763 535 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-208ENST00000524652 MT-CO1P00395 513 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 PRKCGP05129 697 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 CHRM2P08172 466 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 GYS1P13807 737 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 EDNRBP24530 442 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 IL6STP40189 918 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-208ENST00000524652 ABCG1P45844 678 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 NPTX2P47972 431 aa3.67□□□□□ -1.82
CSDE1-208ENST00000524652 SRSF4Q08170 494 aaKnown RBP3.67□□□□□ -1.82
CSDE1-208ENST00000524652 AIMP1Q12904 312 aaKnown RBP3.67□□□□□ -1.82
CSDE1-208ENST00000524652 ACAP2Q15057 778 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms