RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 MPLP40238 635 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 OPRD1P41143 372 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 CACNA2D1P54289 1103 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 SF3A1Q15459 793 aaKnown RBP11.9□□□□□ -0.5
CSMD1-210ENST00000521646 SOWAHAQ2M3V2 549 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 EML3Q32P44 896 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 AASDHQ4L235 1098 aaPredicted RBP11.9□□□□□ -0.5
CSMD1-210ENST00000521646 ARHGAP15Q53QZ3 475 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 LIMS2Q7Z4I7 341 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 CD302Q8IX05 232 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 SYNPOQ8N3V7 929 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 ARL14EPQ8N8R7 260 aaPredicted RBP11.9□□□□□ -0.5
CSMD1-210ENST00000521646 RNF217Q8TC41 542 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 SPPL2BQ8TCT7 592 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 KBTBD7Q8WVZ9 684 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 LARP4BQ92615 738 aaKnown RBP11.9□□□□□ -0.5
CSMD1-210ENST00000521646 CDK5RAP3Q96JB5 506 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 CLIC6Q96NY7 704 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 CBWD1Q9BRT8 395 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 FAM213AQ9BRX8 229 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 ECT2Q9H8V3 914 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 TNRC6BQ9UPQ9 1833 aaKnown RBP11.9□□□□□ -0.5
CSMD1-210ENST00000521646 ITPR1Q14643 2758 aa11.9□□□□□ -0.51
CSMD1-210ENST00000521646 CACNA1EQ15878 2313 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 K7EQS6 105 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 GABRDO14764 452 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 XPOTO43592 962 aaKnown RBP11.89□□□□□ -0.51
CSMD1-210ENST00000521646 PRPF40AO75400 957 aaKnown RBP11.89□□□□□ -0.51
CSMD1-210ENST00000521646 KCNK5O95279 499 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 FGF19O95750 216 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 HOXD13P35453 343 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 MTF1Q14872 753 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 KYAT1Q16773 422 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 C1orf228Q6PIY5 440 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 CACNA2D4Q7Z3S7 1137 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 C12orf40Q86WS4 652 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 BRSK2Q8IWQ3 736 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 KCTD17Q8N5Z5 321 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 OR5B17Q8NGF7 314 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 HPS3Q969F9 1004 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 MYRFLQ96LU7 910 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 AK8Q96MA6 479 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 TSPAN18Q96SJ8 248 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 P2RY13Q9BPV8 354 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 LSM14BQ9BX40 385 aaKnown RBP11.89□□□□□ -0.51
CSMD1-210ENST00000521646 PDE11AQ9HCR9 933 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 ZDHHC4Q9NPG8 344 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 CRTAC1Q9NQ79 661 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 DDX43Q9NXZ2 648 aaKnown RBP11.89□□□□□ -0.51
CSMD1-210ENST00000521646 FBXO2Q9UK22 296 aaPredicted RBP11.89□□□□□ -0.51
CSMD1-210ENST00000521646 AGAP1Q9UPQ3 857 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 PCDHB5Q9Y5E4 795 aa11.89□□□□□ -0.51
CSMD1-210ENST00000521646 PKD1L2Q7Z442 2459 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 CCDC163A0A0D9SF12 145 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 LNP1A1A4G5 178 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 C1QTNF9BB2RNN3 333 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 H0YCG3 227 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 C1QTNF9P0C862 333 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 DDIT3P35638 169 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 AVPR1AP37288 418 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 UBA7P41226 1012 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 PSMC1P62191 440 aaKnown RBP11.88□□□□□ -0.51
CSMD1-210ENST00000521646 SHC2P98077 582 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 TFAMQ00059 246 aaKnown RBP11.88□□□□□ -0.51
CSMD1-210ENST00000521646 VAC14Q08AM6 782 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 GRSF1Q12849 480 aaKnown RBP eCLIP11.88□□□□□ -0.51
CSMD1-210ENST00000521646 DMC1Q14565 340 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 ZNF268Q14587 947 aaPredicted RBP11.88□□□□□ -0.51
CSMD1-210ENST00000521646 VEPH1Q14D04 833 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 LYSMD3Q7Z3D4 306 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 PRICKLE2Q7Z3G6 844 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 TTC16Q8NEE8 873 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 C2orf15Q8WU43 125 aaKnown RBP11.88□□□□□ -0.51
CSMD1-210ENST00000521646 LEO1Q8WVC0 666 aaPredicted RBP11.88□□□□□ -0.51
CSMD1-210ENST00000521646 OSCP1Q8WVF1 389 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 POMGNT1Q8WZA1 660 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 LOXL4Q96JB6 756 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 TPSD1Q9BZJ3 242 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 MTMR12Q9C0I1 747 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 GZF1Q9H116 711 aaPredicted RBP11.88□□□□□ -0.51
CSMD1-210ENST00000521646 PCIF1Q9H4Z3 704 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 TRPC7Q9HCX4 862 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 DSEQ9UL01 958 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 HCN2Q9UL51 889 aa11.88□□□□□ -0.51
CSMD1-210ENST00000521646 ASCC3Q8N3C0 2202 aaKnown RBP11.88□□□□□ -0.51
CSMD1-210ENST00000521646 SMG1Q96Q15 3661 aaKnown RBP11.88□□□□□ -0.51
CSMD1-210ENST00000521646 GON4LQ3T8J9 2241 aa11.87□□□□□ -0.51
CSMD1-210ENST00000521646 THADAQ6YHU6 1953 aa11.87□□□□□ -0.51
CSMD1-210ENST00000521646 SLC35F4A4IF30 521 aa11.87□□□□□ -0.51
CSMD1-210ENST00000521646 CDX4O14627 284 aaPredicted RBP11.87□□□□□ -0.51
CSMD1-210ENST00000521646 TBCAO75347 108 aaKnown RBP11.87□□□□□ -0.51
CSMD1-210ENST00000521646 CCDC192P0DO97 292 aa11.87□□□□□ -0.51
CSMD1-210ENST00000521646 VSIG8P0DPA2 414 aa11.87□□□□□ -0.51
CSMD1-210ENST00000521646 SCTRP47872 440 aa11.87□□□□□ -0.51
CSMD1-210ENST00000521646 SLC6A11P48066 632 aa11.87□□□□□ -0.51
CSMD1-210ENST00000521646 SEC13P55735 322 aa11.87□□□□□ -0.51
CSMD1-210ENST00000521646 FAM160A1Q05DH4 1040 aa11.87□□□□□ -0.51
CSMD1-210ENST00000521646 BFSP1Q12934 665 aa11.87□□□□□ -0.51
CSMD1-210ENST00000521646 FOXD4L5Q5VV16 416 aaPredicted RBP11.87□□□□□ -0.51
CSMD1-210ENST00000521646 PSAPL1Q6NUJ1 521 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms