RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 ARHGAP8P85298 464 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 DPYDQ12882 1025 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 HEATR6Q6AI08 1181 aaKnown RBP26.91■■□□□ 1.9
VEGFA-220ENST00000519767 KRBA2Q6ZNG9 492 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 PRR23BQ6ZRT6 265 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 SV2AQ7L0J3 742 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 WDR5BQ86VZ2 330 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 CD101Q93033 1021 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 RNF38Q9H0F5 515 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 C2orf42Q9NWW7 574 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 COMMD8Q9NX08 183 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 SLC8A2Q9UPR5 921 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 ZNF638Q14966 1978 aaKnown RBP26.91■■□□□ 1.9
VEGFA-220ENST00000519767 DCHS1Q96JQ0 3298 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 LEFTY2O00292 366 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 CLDN5O00501 218 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 SLC9A3R1O14745 358 aaPredicted RBP26.9■■□□□ 1.9
VEGFA-220ENST00000519767 OLFM2O95897 454 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 ABL1P00519 1130 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 TRIM21P19474 475 aaKnown RBP26.9■■□□□ 1.9
VEGFA-220ENST00000519767 CACNA2D1P54289 1103 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 LMNB2Q03252 620 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 ENPEPQ07075 957 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 DMWDQ09019 674 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 UNC93AQ86WB7 457 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 CRYBG2Q8N1P7 616 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 CAMKK1Q8N5S9 505 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 CHAMP1Q96JM3 812 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 MED10Q9BTT4 135 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 FBRSL1Q9HCM7 1045 aaKnown RBP26.9■■□□□ 1.9
VEGFA-220ENST00000519767 DLL3Q9NYJ7 618 aa26.9■■□□□ 1.9
VEGFA-220ENST00000519767 LRP3O75074 770 aa26.89■■□□□ 1.9
VEGFA-220ENST00000519767 EGFP01133 1207 aa26.89■■□□□ 1.9
VEGFA-220ENST00000519767 VAMP7P51809 220 aa26.89■■□□□ 1.9
VEGFA-220ENST00000519767 INTS8Q75QN2 995 aaKnown RBP26.89■■□□□ 1.9
VEGFA-220ENST00000519767 DDX42Q86XP3 938 aaKnown RBP eCLIP26.89■■□□□ 1.94e-7■■■□□ 19
VEGFA-220ENST00000519767 GUF1Q8N442 669 aaKnown RBP26.89■■□□□ 1.9
VEGFA-220ENST00000519767 SMARCD1Q96GM5 515 aa26.89■■□□□ 1.9
VEGFA-220ENST00000519767 DMAP1Q9NPF5 467 aaPredicted RBP26.89■■□□□ 1.9
VEGFA-220ENST00000519767 TMEM30AQ9NV96 361 aa26.89■■□□□ 1.9
VEGFA-220ENST00000519767 KIF26AQ9ULI4 1882 aaPredicted RBP26.88■■□□□ 1.89
VEGFA-220ENST00000519767 RNF40O75150 1001 aa26.88■■□□□ 1.89
VEGFA-220ENST00000519767 ZNF202O95125 648 aa26.88■■□□□ 1.89
VEGFA-220ENST00000519767 ASS1P00966 412 aaKnown RBP26.88■■□□□ 1.89
VEGFA-220ENST00000519767 OAS1P00973 400 aaKnown RBP26.88■■□□□ 1.89
VEGFA-220ENST00000519767 NR2F2P24468 414 aa26.88■■□□□ 1.89
VEGFA-220ENST00000519767 RAP1GAPP47736 663 aa26.88■■□□□ 1.89
VEGFA-220ENST00000519767 ZXDBP98169 803 aa26.88■■□□□ 1.89
VEGFA-220ENST00000519767 SCARA5Q6ZMJ2 495 aa26.88■■□□□ 1.89
VEGFA-220ENST00000519767 PAQR9Q6ZVX9 377 aa26.88■■□□□ 1.89
VEGFA-220ENST00000519767 ADGRG2Q8IZP9 1017 aa26.88■■□□□ 1.89
VEGFA-220ENST00000519767 FBXO32Q969P5 355 aa26.88■■□□□ 1.89
VEGFA-220ENST00000519767 KCNK16Q96T55 309 aa26.88■■□□□ 1.89
VEGFA-220ENST00000519767 IL37Q9NZH6 218 aa26.88■■□□□ 1.89
VEGFA-220ENST00000519767 OBSL1O75147 1896 aa26.87■■□□□ 1.89
VEGFA-220ENST00000519767 KRT13P13646 458 aa26.87■■□□□ 1.89
VEGFA-220ENST00000519767 TGM1P22735 817 aa26.87■■□□□ 1.89
VEGFA-220ENST00000519767 PSMC2P35998 433 aaKnown RBP26.87■■□□□ 1.89
VEGFA-220ENST00000519767 LPAL2Q16609 132 aa26.87■■□□□ 1.89
VEGFA-220ENST00000519767 RSPO4Q2I0M5 234 aaPredicted RBP26.87■■□□□ 1.89
VEGFA-220ENST00000519767 SNX30Q5VWJ9 437 aa26.87■■□□□ 1.89
VEGFA-220ENST00000519767 CEP68Q76N32 757 aa26.87■■□□□ 1.89
VEGFA-220ENST00000519767 DGLUCYQ7Z3D6 616 aa26.87■■□□□ 1.89
VEGFA-220ENST00000519767 ACOT1Q86TX2 421 aa26.87■■□□□ 1.89
VEGFA-220ENST00000519767 FAM35AQ86V20 835 aa26.87■■□□□ 1.89
VEGFA-220ENST00000519767 IMPG2Q9BZV3 1241 aa26.87■■□□□ 1.89
VEGFA-220ENST00000519767 SDCBP2Q9H190 292 aa26.87■■□□□ 1.89
VEGFA-220ENST00000519767 USP18Q9UMW8 372 aa26.87■■□□□ 1.89
VEGFA-220ENST00000519767 CPQQ9Y646 472 aa26.87■■□□□ 1.89
VEGFA-220ENST00000519767 TNFRSF10BO14763 440 aa26.86■■□□□ 1.89
VEGFA-220ENST00000519767 HLA-DRAP01903 254 aa26.86■■□□□ 1.89
VEGFA-220ENST00000519767 PRR29P0C7W0 189 aa26.86■■□□□ 1.89
VEGFA-220ENST00000519767 IFRD2Q12894 506 aaPredicted RBP26.86■■□□□ 1.89
VEGFA-220ENST00000519767 ADAM9Q13443 819 aa26.86■■□□□ 1.89
VEGFA-220ENST00000519767 C1orf220Q5T0J3 134 aa26.86■■□□□ 1.89
VEGFA-220ENST00000519767 PKN3Q6P5Z2 889 aa26.86■■□□□ 1.89
VEGFA-220ENST00000519767 FUKQ8N0W3 1084 aa26.86■■□□□ 1.89
VEGFA-220ENST00000519767 DNAI2Q9GZS0 605 aa26.86■■□□□ 1.89
VEGFA-220ENST00000519767 TBC1D14Q9P2M4 693 aa26.86■■□□□ 1.89
VEGFA-220ENST00000519767 CHORDC1Q9UHD1 332 aaPredicted RBP26.86■■□□□ 1.89
VEGFA-220ENST00000519767 MAPK8IP1Q9UQF2 711 aa26.86■■□□□ 1.89
VEGFA-220ENST00000519767 GREB1Q4ZG55 1949 aa26.85■■□□□ 1.89
VEGFA-220ENST00000519767 AP1G2O75843 785 aa26.85■■□□□ 1.89
VEGFA-220ENST00000519767 AKAP3O75969 853 aa26.85■■□□□ 1.89
VEGFA-220ENST00000519767 PIK3CAP42336 1068 aa26.85■■□□□ 1.89
VEGFA-220ENST00000519767 NDST1P52848 882 aa26.85■■□□□ 1.89
VEGFA-220ENST00000519767 HECTD3Q5T447 861 aa26.85■■□□□ 1.89
VEGFA-220ENST00000519767 SYT13Q7L8C5 426 aa26.85■■□□□ 1.89
VEGFA-220ENST00000519767 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.85■■□□□ 1.89
VEGFA-220ENST00000519767 SCAMP5Q8TAC9 235 aa26.85■■□□□ 1.89
VEGFA-220ENST00000519767 CYP3A43Q9HB55 503 aa26.85■■□□□ 1.89
VEGFA-220ENST00000519767 FAM92AA1XBS5 289 aa26.84■■□□□ 1.89
VEGFA-220ENST00000519767 FOXD2O60548 495 aaPredicted RBP26.84■■□□□ 1.89
VEGFA-220ENST00000519767 MBL2P11226 248 aaPredicted RBP26.84■■□□□ 1.89
VEGFA-220ENST00000519767 TUBP50607 506 aa26.84■■□□□ 1.89
VEGFA-220ENST00000519767 MCCD1P59942 119 aaPredicted RBP26.84■■□□□ 1.89
VEGFA-220ENST00000519767 SRSF5Q13243 272 aaKnown RBP26.84■■□□□ 1.89
VEGFA-220ENST00000519767 FILIP1Q7Z7B0 1213 aa26.84■■□□□ 1.89
VEGFA-220ENST00000519767 FAM186BQ8IYM0 893 aa26.84■■□□□ 1.89
VEGFA-220ENST00000519767 CCDC150Q8NCX0 1101 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms