RNA–Protein interactions for RNA: ENST00000516145.1

RNU6-496P-201, Transcript of RNA, U6 small nuclear 496, pseudogene, humanhuman

BASIC

Gene RNU6-496P, Length 99 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-496P-201ENST00000516145 IZUMO1Q8IYV9 350 aa2.6□□□□□ -1.99
RNU6-496P-201ENST00000516145 ABRAQ8N0Z2 381 aa2.6□□□□□ -1.99
RNU6-496P-201ENST00000516145 CELF5Q8N6W0 485 aaKnown RBP2.6□□□□□ -1.99
RNU6-496P-201ENST00000516145 MAP4K1Q92918 833 aa2.6□□□□□ -1.99
RNU6-496P-201ENST00000516145 THOC3Q96J01 351 aaKnown RBP2.6□□□□□ -1.99
RNU6-496P-201ENST00000516145 FAM167AQ96KS9 214 aa2.6□□□□□ -1.99
RNU6-496P-201ENST00000516145 FAM234AQ9H0X4 552 aa2.6□□□□□ -1.99
RNU6-496P-201ENST00000516145 LPAR3Q9UBY5 353 aa2.6□□□□□ -1.99
RNU6-496P-201ENST00000516145 TMX2Q9Y320 296 aa2.6□□□□□ -1.99
RNU6-496P-201ENST00000516145 PRKAB1Q9Y478 270 aa2.6□□□□□ -1.99
RNU6-496P-201ENST00000516145 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.6□□□□□ -1.99
RNU6-496P-201ENST00000516145 MYO1CO00159 1063 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 GTPBP1O00178 669 aaKnown RBP2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 PSMD9O00233 223 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 MT-CO3P00414 261 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 T-ENOLP0DO92 83 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 PRKAG1P54619 331 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 UCP3P55916 312 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 SUMO2P61956 95 aaKnown RBP2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 FAM50AQ14320 339 aaKnown RBP2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 ZIK1Q3SY52 487 aaPredicted RBP2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 KHDC1LQ5JSQ8 128 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 DAB2IPQ5VWQ8 1189 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 ZNF549Q6P9A3 640 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 TMEM65Q6PI78 240 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 LVRNQ6Q4G3 990 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 SFTPA1Q8IWL2 248 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 ARFGAP1Q8N6T3 406 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 RBMXL3Q8N7X1 1067 aaKnown RBP2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 ZNF398Q8TD17 642 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 PNISRQ8TF01 805 aaKnown RBP2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 TMEM171Q8WVE6 324 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 SLC35A4Q96G79 324 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 C17orf80Q9BSJ5 609 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 SARS2Q9NP81 518 aaKnown RBP2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 CPA4Q9UI42 421 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 HS3ST3B1Q9Y662 390 aa2.59□□□□□ -1.99
RNU6-496P-201ENST00000516145 PRSS44E7EML9 344 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 TLR2O60603 784 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 TULP3O75386 442 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 TOMM40O96008 361 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 CYP2C9P11712 490 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 PHKG2P15735 406 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 KCNA3P22001 575 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 GKP32189 559 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 DGKEP52429 567 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 NKX6-1P78426 367 aaPredicted RBP2.58□□□□□ -2
RNU6-496P-201ENST00000516145 RHDQ02161 417 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 SRSF1Q07955 248 aaKnown RBP eCLIP2.58□□□□□ -2
RNU6-496P-201ENST00000516145 SEC23BQ15437 767 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 PGS1Q32NB8 556 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 KRTAP27-1Q3LI81 207 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 MGAT5BQ3V5L5 792 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 TMTC4Q5T4D3 741 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 UBAP2Q5T6F2 1119 aaKnown RBP2.58□□□□□ -2
RNU6-496P-201ENST00000516145 ANO7Q6IWH7 933 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 KRT78Q8N1N4 520 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 PRR18Q8N4B5 295 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 ZBTB8BQ8NAP8 495 aaPredicted RBP2.58□□□□□ -2
RNU6-496P-201ENST00000516145 HS6ST2Q96MM7 605 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 CTAGE1Q96RT6 745 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 MESP1Q9BRJ9 268 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 ARMT1Q9H993 441 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 TNKSO95271 1327 aa2.58□□□□□ -2
RNU6-496P-201ENST00000516145 PMPCBO75439 489 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 CTSAP10619 480 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 APEHP13798 732 aaKnown RBP2.57□□□□□ -2
RNU6-496P-201ENST00000516145 SLC11A2P49281 568 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 RPS13P62277 151 aaKnown RBP2.57□□□□□ -2
RNU6-496P-201ENST00000516145 CFHR1Q03591 330 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 LMAN2Q12907 356 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 LARS2Q15031 903 aaKnown RBP2.57□□□□□ -2
RNU6-496P-201ENST00000516145 C4orf46Q504U0 113 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 ZNF585BQ52M93 769 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 RANBP10Q6VN20 620 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 DEF8Q6ZN54 512 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 DCDC5Q6ZRR9 648 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 Q6ZTC4 211 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 PTCHD4Q6ZW05 846 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 CATIPQ7Z7H3 387 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 LIX1LQ8IVB5 337 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 C16orf71Q8IYS4 520 aaPredicted RBP2.57□□□□□ -2
RNU6-496P-201ENST00000516145 SLC15A4Q8N697 577 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 MAFAQ8NHW3 353 aaPredicted RBP2.57□□□□□ -2
RNU6-496P-201ENST00000516145 BPIFB1Q8TDL5 484 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 PPP2R3CQ969Q6 453 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 MTFMTQ96DP5 389 aaKnown RBP2.57□□□□□ -2
RNU6-496P-201ENST00000516145 CAMK1GQ96NX5 476 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 SMAD5Q99717 465 aaKnown RBP2.57□□□□□ -2
RNU6-496P-201ENST00000516145 TRMOQ9BU70 441 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 SLC13A1Q9BZW2 595 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 TMX1Q9H3N1 280 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 GBA2Q9HCG7 927 aaPredicted RBP2.57□□□□□ -2
RNU6-496P-201ENST00000516145 CNNM1Q9NRU3 951 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 TTC3P53804 2025 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 NOTCH4Q99466 2003 aa2.57□□□□□ -2
RNU6-496P-201ENST00000516145 SNUPNO95149 360 aaKnown RBP2.56□□□□□ -2
RNU6-496P-201ENST00000516145 IL33O95760 270 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms