RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 DCAF17Q5H9S7 520 aaPredicted RBP25.99■■□□□ 1.75
SNF8-213ENST00000514929 FBXL13Q8NEE6 735 aa25.99■■□□□ 1.75
SNF8-213ENST00000514929 SLC2A14Q8TDB8 520 aa25.99■■□□□ 1.75
SNF8-213ENST00000514929 SH3RF2Q8TEC5 729 aa25.99■■□□□ 1.75
SNF8-213ENST00000514929 DNAI2Q9GZS0 605 aa25.99■■□□□ 1.75
SNF8-213ENST00000514929 HPS4Q9NQG7 708 aa25.99■■□□□ 1.75
SNF8-213ENST00000514929 FAM49BQ9NUQ9 324 aa25.99■■□□□ 1.75
SNF8-213ENST00000514929 ARHGAP26Q9UNA1 814 aa25.99■■□□□ 1.75
SNF8-213ENST00000514929 CACNA1IQ9P0X4 2223 aa25.98■■□□□ 1.75
SNF8-213ENST00000514929 MYO15AQ9UKN7 3530 aa25.98■■□□□ 1.75
SNF8-213ENST00000514929 ARSAP15289 507 aa25.98■■□□□ 1.75
SNF8-213ENST00000514929 CD58P19256 250 aa25.98■■□□□ 1.75
SNF8-213ENST00000514929 PPP1R2P41236 205 aa25.98■■□□□ 1.75
SNF8-213ENST00000514929 IFNAR2P48551 515 aa25.98■■□□□ 1.75
SNF8-213ENST00000514929 USP4Q13107 963 aa25.98■■□□□ 1.75
SNF8-213ENST00000514929 ZNF528Q3MIS6 628 aa25.98■■□□□ 1.75
SNF8-213ENST00000514929 ZC3H3Q8IXZ2 948 aaKnown RBP25.98■■□□□ 1.75
SNF8-213ENST00000514929 C12orf29Q8N999 325 aa25.98■■□□□ 1.75
SNF8-213ENST00000514929 PDZD8Q8NEN9 1154 aa25.98■■□□□ 1.75
SNF8-213ENST00000514929 FBXO32Q969P5 355 aa25.98■■□□□ 1.75
SNF8-213ENST00000514929 NT5C1AQ9BXI3 368 aa25.98■■□□□ 1.75
SNF8-213ENST00000514929 RAB20Q9NX57 234 aa25.98■■□□□ 1.75
SNF8-213ENST00000514929 DUS2Q9NX74 493 aaKnown RBP25.98■■□□□ 1.75
SNF8-213ENST00000514929 ZFHX2Q9C0A1 2572 aaPredicted RBP25.98■■□□□ 1.75
SNF8-213ENST00000514929 USP34Q70CQ2 3546 aa25.97■■□□□ 1.75
SNF8-213ENST00000514929 OSCP1Q8WVF1 389 aa25.97■■□□□ 1.75
SNF8-213ENST00000514929 SEMA4DQ92854 862 aa25.97■■□□□ 1.75
SNF8-213ENST00000514929 DHTKD1Q96HY7 919 aaPredicted RBP25.97■■□□□ 1.75
SNF8-213ENST00000514929 TWNKQ96RR1 684 aa25.97■■□□□ 1.75
SNF8-213ENST00000514929 SEMA4AQ9H3S1 761 aa25.97■■□□□ 1.75
SNF8-213ENST00000514929 RBM12Q9NTZ6 932 aaKnown RBP25.97■■□□□ 1.75
SNF8-213ENST00000514929 ARMCX3Q9UH62 379 aaPredicted RBP25.97■■□□□ 1.75
SNF8-213ENST00000514929 WNT6Q9Y6F9 365 aa25.97■■□□□ 1.75
SNF8-213ENST00000514929 ADORA2BP29275 332 aa25.96■■□□□ 1.75
SNF8-213ENST00000514929 SLC5A3P53794 718 aa25.96■■□□□ 1.75
SNF8-213ENST00000514929 AMPD2Q01433 879 aa25.96■■□□□ 1.75
SNF8-213ENST00000514929 WDR44Q5JSH3 913 aa25.96■■□□□ 1.75
SNF8-213ENST00000514929 DGKKQ5KSL6 1271 aa25.96■■□□□ 1.75
SNF8-213ENST00000514929 CPA6Q8N4T0 437 aa25.96■■□□□ 1.75
SNF8-213ENST00000514929 SCAMP5Q8TAC9 235 aa25.96■■□□□ 1.75
SNF8-213ENST00000514929 OVCA2Q8WZ82 227 aa25.96■■□□□ 1.75
SNF8-213ENST00000514929 SMOQ99835 787 aa25.96■■□□□ 1.75
SNF8-213ENST00000514929 CHMP5Q9NZZ3 219 aa25.96■■□□□ 1.75
SNF8-213ENST00000514929 VPS13AQ96RL7 3174 aa25.95■■□□□ 1.75
SNF8-213ENST00000514929 OTOL1A6NHN0 477 aaPredicted RBP25.95■■□□□ 1.74
SNF8-213ENST00000514929 TNFRSF10BO14763 440 aa25.95■■□□□ 1.74
SNF8-213ENST00000514929 CILPO75339 1184 aa25.95■■□□□ 1.74
SNF8-213ENST00000514929 FAM200BP0CF97 657 aa25.95■■□□□ 1.74
SNF8-213ENST00000514929 TCF3P15923 654 aa25.95■■□□□ 1.74
SNF8-213ENST00000514929 CD44P16070 742 aaKnown RBP25.95■■□□□ 1.74
SNF8-213ENST00000514929 MAP3K7CLP57077 242 aa25.95■■□□□ 1.74
SNF8-213ENST00000514929 PPP2R5DQ14738 602 aa25.95■■□□□ 1.74
SNF8-213ENST00000514929 KLHL10Q6JEL2 608 aa25.95■■□□□ 1.74
SNF8-213ENST00000514929 TSSK4Q6SA08 328 aa25.95■■□□□ 1.74
SNF8-213ENST00000514929 ATP2A3Q93084 1043 aa25.95■■□□□ 1.74
SNF8-213ENST00000514929 CYFIP2Q96F07 1278 aa25.95■■□□□ 1.74
SNF8-213ENST00000514929 FAXDC2Q96IV6 333 aa25.95■■□□□ 1.74
SNF8-213ENST00000514929 RNF38Q9H0F5 515 aa25.95■■□□□ 1.74
SNF8-213ENST00000514929 CSNK1G1Q9HCP0 422 aa25.95■■□□□ 1.74
SNF8-213ENST00000514929 PRMT8Q9NR22 394 aaPredicted RBP25.95■■□□□ 1.74
SNF8-213ENST00000514929 BEST1O76090 585 aa25.94■■□□□ 1.74
SNF8-213ENST00000514929 OAS1P00973 400 aaKnown RBP25.94■■□□□ 1.74
SNF8-213ENST00000514929 CCR3P51677 355 aa25.94■■□□□ 1.74
SNF8-213ENST00000514929 SLC7A9P82251 487 aa25.94■■□□□ 1.74
SNF8-213ENST00000514929 CBWD6Q4V339 395 aa25.94■■□□□ 1.74
SNF8-213ENST00000514929 CBWD3Q5JTY5 395 aa25.94■■□□□ 1.74
SNF8-213ENST00000514929 CBWD5Q5RIA9 395 aa25.94■■□□□ 1.74
SNF8-213ENST00000514929 ZMIZ2Q8NF64 920 aa25.94■■□□□ 1.74
SNF8-213ENST00000514929 HNRNPABQ99729 332 aaKnown RBP25.94■■□□□ 1.74
SNF8-213ENST00000514929 COMMD8Q9NX08 183 aa25.94■■□□□ 1.74
SNF8-213ENST00000514929 CHORDC1Q9UHD1 332 aaPredicted RBP25.94■■□□□ 1.74
SNF8-213ENST00000514929 CPQQ9Y646 472 aa25.94■■□□□ 1.74
SNF8-213ENST00000514929 HELZP42694 1942 aaKnown RBP25.94■■□□□ 1.74
SNF8-213ENST00000514929 LEFTY2O00292 366 aa25.93■■□□□ 1.74
SNF8-213ENST00000514929 BIN1O00499 593 aa25.93■■□□□ 1.74
SNF8-213ENST00000514929 OLFM2O95897 454 aa25.93■■□□□ 1.74
SNF8-213ENST00000514929 ZNF394Q53GI3 561 aa25.93■■□□□ 1.74
SNF8-213ENST00000514929 MAMSTRQ6ZN01 415 aa25.93■■□□□ 1.74
SNF8-213ENST00000514929 TTC39CQ8N584 583 aa25.93■■□□□ 1.74
SNF8-213ENST00000514929 WHAMMQ8TF30 809 aa25.93■■□□□ 1.74
SNF8-213ENST00000514929 ECT2Q9H8V3 914 aa25.93■■□□□ 1.74
SNF8-213ENST00000514929 METTL14Q9HCE5 456 aaKnown RBP25.93■■□□□ 1.74
SNF8-213ENST00000514929 SMPD4Q9NXE4 827 aa25.93■■□□□ 1.74
SNF8-213ENST00000514929 IL37Q9NZH6 218 aa25.93■■□□□ 1.74
SNF8-213ENST00000514929 LMNAP02545 664 aaKnown RBP25.92■■□□□ 1.74
SNF8-213ENST00000514929 MBL2P11226 248 aaPredicted RBP25.92■■□□□ 1.74
SNF8-213ENST00000514929 CXCL12P48061 93 aa25.92■■□□□ 1.74
SNF8-213ENST00000514929 UBE2HP62256 183 aa25.92■■□□□ 1.74
SNF8-213ENST00000514929 ZXDBP98169 803 aa25.92■■□□□ 1.74
SNF8-213ENST00000514929 GRSF1Q12849 480 aaKnown RBP eCLIP25.92■■□□□ 1.741e-7■■■□□ 16.4
SNF8-213ENST00000514929 CCINQ13939 588 aa25.92■■□□□ 1.74
SNF8-213ENST00000514929 MORC3Q14149 939 aa25.92■■□□□ 1.74
SNF8-213ENST00000514929 GAS6Q14393 721 aa25.92■■□□□ 1.74
SNF8-213ENST00000514929 EML3Q32P44 896 aa25.92■■□□□ 1.74
SNF8-213ENST00000514929 CCDC40Q4G0X9 1142 aa25.92■■□□□ 1.74
SNF8-213ENST00000514929 Q6ZS52 159 aa25.92■■□□□ 1.74
SNF8-213ENST00000514929 SPEM1Q8N4L4 309 aa25.92■■□□□ 1.74
SNF8-213ENST00000514929 NELFBQ8WX92 580 aa25.92■■□□□ 1.74
SNF8-213ENST00000514929 ATRIPQ8WXE1 791 aa25.92■■□□□ 1.74
SNF8-213ENST00000514929 EXOC4Q96A65 974 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms