RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CHEK2O96017 543 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 ABCB1P08183 1280 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 TCEA1P23193 301 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 SOX5P35711 763 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 PAFAH1B1P43034 410 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 VPS41P49754 854 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 RARRES1P49788 294 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 CYP2J2P51589 502 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 KPNA1P52294 538 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 BFSP1Q12934 665 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 UGCGQ16739 394 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 GLE1Q53GS7 698 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 C1orf220Q5T0J3 134 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 KLHL35Q6PF15 583 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 PADI6Q6TGC4 694 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 LRRTM3Q86VH5 581 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 CALML6Q8TD86 181 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 PHOX2BQ99453 314 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 PKD2L1Q9P0L9 805 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 RWDD3Q9Y3V2 267 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 PAPPA2Q9BXP8 1791 aa7.8□□□□□ -1.16
PDLIM5-219ENST00000514743 NCANO14594 1321 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 ASTN2O75129 1339 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 A0A0A6YYK5 440 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 TMEM150BA6NC51 233 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 GMNCA6NCL1 334 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 XPOTO43592 962 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 GUCY1B2O75343 617 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 EPHB4P54760 987 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 NAA20P61599 178 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 KCNJ2P63252 427 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 KDSRQ06136 332 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 NFE2L1Q14494 772 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 R3HDM1Q15032 1099 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 C6orf132Q5T0Z8 1188 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 CARNMT1Q8N4J0 409 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 PDZD8Q8NEN9 1154 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 PLEKHO2Q8TD55 490 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 SYTL5Q8TDW5 730 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 TSNARE1Q96NA8 513 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 OLFM3Q96PB7 478 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 CCDC77Q9BR77 488 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 ZBED2Q9BTP6 218 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 STK33Q9BYT3 514 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 INTS2Q9H0H0 1204 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 DBR1Q9UK59 544 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 VANGL2Q9ULK5 521 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 LRCH1Q9Y2L9 728 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 SPEF1Q9Y4P9 236 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 PCDHGA3Q9Y5H0 932 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 A0A0G2JMZ2 1700 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 LRRC37A2A6NM11 1700 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 CCT8L1PA6NM43 557 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 SRRM3A6NNA2 597 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 PRMT3O60678 531 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 SLC4A1P02730 911 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 P4HBP07237 508 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 FAM153BP0C7A2 387 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 NAGAP17050 411 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 ECHS1P30084 290 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 PDE1CQ14123 709 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 DRAP1Q14919 205 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 PGM5Q15124 567 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 FAM153CQ494X1 144 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 LIN52Q52LA3 116 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 C4orf22Q6V702 233 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 INTS8Q75QN2 995 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 MIER3Q7Z3K6 550 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 NIM1KQ8IY84 436 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 CHPFQ8IZ52 775 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 SCFD2Q8WU76 684 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 NAT14Q8WUY8 206 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 WNK4Q96J92 1243 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 KIAA1683Q9H0B3 1180 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 SIRT5Q9NXA8 310 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 APEX2Q9UBZ4 518 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 FAM153AQ9UHL3 310 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 DNAJC12Q9UKB3 198 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 NFU1Q9UMS0 254 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 MYH9P35579 1960 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 ARHGEF35A5YM69 484 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 K7ENM7 598 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 LYPLA2O95372 231 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 CYP1A1P04798 512 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 MAPTP10636 758 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 RCVRNP35243 200 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 STAT1P42224 750 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 CARSP49589 748 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 MYL6P60660 151 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 QPCTQ16769 361 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 ARMC4Q5T2S8 1044 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 DAB2IPQ5VWQ8 1189 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 EMBQ6PCB8 327 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 ZC3H18Q86VM9 953 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 KLHL7Q8IXQ5 586 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 RIBC1Q8N443 379 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 ACTRT1Q8TDG2 376 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 NMD3Q96D46 503 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 TAAR1Q96RJ0 339 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms