RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 TMEM191CA6NGB0 347 aa20.74■□□□□ 0.91
SSBP2-218ENST00000514493 MYO1FO00160 1098 aa20.74■□□□□ 0.91
SSBP2-218ENST00000514493 PDE2AO00408 941 aaPredicted RBP20.74■□□□□ 0.91
SSBP2-218ENST00000514493 PAPSS1O43252 624 aaPredicted RBP20.74■□□□□ 0.91
SSBP2-218ENST00000514493 COMTP21964 271 aa20.74■□□□□ 0.91
SSBP2-218ENST00000514493 BDNFP23560 247 aa20.74■□□□□ 0.91
SSBP2-218ENST00000514493 PAFAH1B1P43034 410 aa20.74■□□□□ 0.91
SSBP2-218ENST00000514493 RPL7AP62424 266 aaKnown RBP20.74■□□□□ 0.91
SSBP2-218ENST00000514493 ERCC6LQ2NKX8 1250 aa20.74■□□□□ 0.91
SSBP2-218ENST00000514493 CFAP221Q4G0U5 840 aa20.74■□□□□ 0.91
SSBP2-218ENST00000514493 TEX35Q5T0J7 233 aa20.74■□□□□ 0.91
SSBP2-218ENST00000514493 OR6B2Q6IFH4 312 aa20.74■□□□□ 0.91
SSBP2-218ENST00000514493 DCUN1D2Q6PH85 259 aa20.74■□□□□ 0.91
SSBP2-218ENST00000514493 SPATA2LQ8IUW3 424 aaPredicted RBP20.74■□□□□ 0.91
SSBP2-218ENST00000514493 CLP1Q92989 425 aaKnown RBP20.74■□□□□ 0.91
SSBP2-218ENST00000514493 FUBP3Q96I24 572 aaKnown RBP eCLIP20.74■□□□□ 0.91
SSBP2-218ENST00000514493 RAD9AQ99638 391 aa20.74■□□□□ 0.91
SSBP2-218ENST00000514493 GDF15Q99988 308 aa20.74■□□□□ 0.91
SSBP2-218ENST00000514493 DMAP1Q9NPF5 467 aaPredicted RBP20.74■□□□□ 0.91
SSBP2-218ENST00000514493 METTL5Q9NRN9 209 aaKnown RBP20.74■□□□□ 0.91
SSBP2-218ENST00000514493 MTRRQ9UBK8 725 aa20.74■□□□□ 0.91
SSBP2-218ENST00000514493 DDX3YO15523 660 aaKnown RBP20.73■□□□□ 0.91
SSBP2-218ENST00000514493 KRT3P12035 628 aa20.73■□□□□ 0.91
SSBP2-218ENST00000514493 ELF2Q15723 593 aa20.73■□□□□ 0.91
SSBP2-218ENST00000514493 PIWIL1Q96J94 861 aaKnown RBP20.73■□□□□ 0.91
SSBP2-218ENST00000514493 UBXN6Q9BZV1 441 aa20.73■□□□□ 0.91
SSBP2-218ENST00000514493 PNPLA8Q9NP80 782 aa20.73■□□□□ 0.91
SSBP2-218ENST00000514493 PCDHB12Q9Y5F1 795 aa20.73■□□□□ 0.91
SSBP2-218ENST00000514493 GREB1Q4ZG55 1949 aa20.73■□□□□ 0.91
SSBP2-218ENST00000514493 ZNF638Q14966 1978 aaKnown RBP20.73■□□□□ 0.91
SSBP2-218ENST00000514493 SPOPO43791 374 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 SCNN1AP37088 669 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 ITIH3Q06033 890 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 ADIGQ0VDE8 80 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 PRSS55Q6UWB4 352 aaPredicted RBP20.72■□□□□ 0.91
SSBP2-218ENST00000514493 DDX53Q86TM3 631 aaKnown RBP20.72■□□□□ 0.91
SSBP2-218ENST00000514493 FNIP1Q8TF40 1166 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 RIN2Q8WYP3 895 aaPredicted RBP20.72■□□□□ 0.91
SSBP2-218ENST00000514493 IP6K2Q9UHH9 426 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 BACE2Q9Y5Z0 518 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 PLXNA3P51805 1871 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 HHLA1C9JL84 531 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 TLL1O43897 1013 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 PROSCO94903 275 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 LCP1P13796 627 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 MAN1A1P33908 653 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 SLC1A1P43005 524 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 GLUD2P49448 558 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 SLC6A3Q01959 620 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 PSMD5Q16401 504 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 RSPO2Q6UXX9 243 aaPredicted RBP20.72■□□□□ 0.91
SSBP2-218ENST00000514493 UBL4BQ8N7F7 174 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 JOSD2Q8TAC2 188 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 CD101Q93033 1021 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 KCNK16Q96T55 309 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 CARD9Q9H257 536 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 LRRC4Q9HBW1 653 aa20.72■□□□□ 0.91
SSBP2-218ENST00000514493 ABI2Q9NYB9 513 aaPredicted RBP20.72■□□□□ 0.91
SSBP2-218ENST00000514493 CPB1P15086 417 aa20.71■□□□□ 0.91
SSBP2-218ENST00000514493 DSG1Q02413 1049 aa20.71■□□□□ 0.91
SSBP2-218ENST00000514493 ZNF252P-AS1Q0IIN9 211 aa20.71■□□□□ 0.91
SSBP2-218ENST00000514493 SMARCB1Q12824 385 aa20.71■□□□□ 0.91
SSBP2-218ENST00000514493 RAB41Q5JT25 222 aa20.71■□□□□ 0.91
SSBP2-218ENST00000514493 KIAA1841Q6NSI8 718 aa20.71■□□□□ 0.91
SSBP2-218ENST00000514493 SLC26A9Q7LBE3 791 aa20.71■□□□□ 0.91
SSBP2-218ENST00000514493 SCUBE3Q8IX30 993 aa20.71■□□□□ 0.91
SSBP2-218ENST00000514493 MS4A14Q96JA4 679 aa20.71■□□□□ 0.91
SSBP2-218ENST00000514493 STK39Q9UEW8 545 aa20.71■□□□□ 0.91
SSBP2-218ENST00000514493 PCDHB5Q9Y5E4 795 aa20.71■□□□□ 0.91
SSBP2-218ENST00000514493 CCDC66A2RUB6 948 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 RFC1P35251 1148 aaPredicted RBP20.7■□□□□ 0.9
SSBP2-218ENST00000514493 OGDHQ02218 1023 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 ADCY1Q08828 1119 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 GPR17Q13304 367 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 C9orf50Q5SZB4 431 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 SLC8B1Q6J4K2 584 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 VSTM1Q6UX27 236 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 CHRDL2Q6WN34 429 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 GPRIN1Q7Z2K8 1008 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 CPNE8Q86YQ8 564 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 SIX6OS1Q8N1H7 587 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 NIPA2Q8N8Q9 360 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.7■□□□□ 0.9
SSBP2-218ENST00000514493 ACTRT1Q8TDG2 376 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 EHD2Q9NZN4 543 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 TMEM59LQ9UK28 342 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 CDY1Q9Y6F8 540 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 LAMA3Q16787 3333 aa20.7■□□□□ 0.9
SSBP2-218ENST00000514493 COL4A4P53420 1690 aaPredicted RBP20.7■□□□□ 0.9
SSBP2-218ENST00000514493 LCHNA4D1U4 455 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 MTMR11A4FU01 709 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 F8VP50 259 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 FBXO21O94952 628 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 CYP2F1P24903 491 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 CTNNA2P26232 953 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 CTNNA1P35221 906 aaKnown RBP20.69■□□□□ 0.9
SSBP2-218ENST00000514493 MAGEA11P43364 429 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 RABGGTBP53611 331 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 RASGEF1CQ8N431 466 aa20.69■□□□□ 0.9
SSBP2-218ENST00000514493 NOA1Q8NC60 698 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms