RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 ZC3H11AO75152 810 aaKnown RBP eCLIP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 SPATA31C1P0DKV0 1188 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 THRAP10827 490 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 ASTE1Q2TB18 679 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 ALYREFQ86V81 257 aaKnown RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 PTPRN2Q92932 1015 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 ACTL7BQ9Y614 415 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 ARHGEF37A1IGU5 675 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 NKRFO15226 690 aaKnown RBP eCLIP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 DCXO43602 365 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 EDF1O60869 148 aaKnown RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 SRP72O76094 671 aaKnown RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 ADRB2P07550 413 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 FGRP09769 529 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 SLC1A6P48664 564 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 PPM1FP49593 454 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 TPI1P60174 286 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 TSTA3Q13630 321 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 CCDC92Q53HC0 331 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 DSTYKQ6XUX3 929 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 RIPOR1Q6ZS17 1223 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 TRABD2AQ86V40 505 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 PCDHB18PQ96TA0 734 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 GRIP2Q9C0E4 1043 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 TMEM39BQ9GZU3 492 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 ARL8BQ9NVJ2 186 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 CASZ1Q86V15 1759 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 RPTORQ8N122 1335 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 STRNO43815 780 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 CSDE1O75534 798 aaKnown RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 SMNDC1O75940 238 aaKnown RBP eCLIP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 ITGB3P05106 788 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 ALADP13716 330 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 C1QBPQ07021 282 aaKnown RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 GOLGA7BQ2TAP0 167 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 FAM71AQ8IYT1 594 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 BEST2Q8NFU1 509 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 RFWD2Q8NHY2 731 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 DDI1Q8WTU0 396 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 JADE3Q92613 823 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 SPATA33Q96N06 139 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 UNKQ9C0B0 810 aaKnown RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 FAM192AQ9GZU8 254 aa8.04□□□□□ -1.12
CLCN3-209ENST00000513761 SARS2Q9NP81 518 aaKnown RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 R3HDM2Q9Y2K5 976 aaKnown RBP8.04□□□□□ -1.12
CLCN3-209ENST00000513761 C3P01024 1663 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 MEIS2O14770 477 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 ZMPSTE24O75844 475 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 MOCS2O96007 188 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-209ENST00000513761 SKIV2L2P42285 1042 aaKnown RBP8.03□□□□□ -1.12
CLCN3-209ENST00000513761 PIGWQ7Z7B1 504 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 CLEC4FQ8N1N0 589 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 RNF139Q8WU17 664 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 CEP19Q96LK0 163 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 TRAPPC9Q96Q05 1148 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 CEP41Q9BYV8 373 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 LRMDAQ9H2I8 198 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 EML4Q9HC35 981 aaKnown RBP8.03□□□□□ -1.12
CLCN3-209ENST00000513761 DCDC2Q9UHG0 476 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 FSCN2O14926 492 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 ADRA2BP18089 450 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 GPR141Q7Z602 305 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 KATNAL2Q8IYT4 538 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 SIKE1Q9BRV8 207 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 FRMD8Q9BZ67 464 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-209ENST00000513761 VPS33BQ9H267 617 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 AVENQ9NQS1 362 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-209ENST00000513761 SLC17A7Q9P2U7 560 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 UBA6A0AVT1 1052 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-209ENST00000513761 LIASO43766 372 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 ENTPD3O75355 529 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 CPA3P15088 417 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 ANPEPP15144 967 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 MUTP22033 750 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 GARTP22102 1010 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 GSCP56915 257 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-209ENST00000513761 BLMHQ13867 455 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 PARP6Q2NL67 630 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 DPP9Q86TI2 863 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 ZFPM1Q8IX07 1006 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 PRPF18Q99633 342 aaKnown RBP8.03□□□□□ -1.12
CLCN3-209ENST00000513761 APOL2Q9BQE5 337 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 DCUN1D5Q9BTE7 237 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 NT5C1AQ9BXI3 368 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 DENND2DQ9H6A0 471 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-209ENST00000513761 CACNA1FO60840 1977 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 USP1O94782 785 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 PAEPP09466 180 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 GFAPP14136 432 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 CHRNA5P30532 468 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 TAS2R40P59535 323 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 SLC1A5Q15758 541 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 CIAPIN1Q6FI81 312 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 MFSD5Q6N075 450 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 SETD3Q86TU7 594 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-209ENST00000513761 SEPT12Q8IYM1 358 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 SHISA4Q96DD7 197 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 GMCL1Q96IK5 515 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 HOXC10Q9NYD6 342 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms