RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 FGD4Q96M96 766 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 LSG1Q9H089 658 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 TNMDQ9H2S6 317 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 GOLGA6AQ9NYA3 693 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 EBF1Q9UH73 591 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 GGT7Q9UJ14 662 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 NAGPAQ9UK23 515 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PRRC2BQ5JSZ5 2229 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 IGKV6-21A0A0C4DH24 114 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 hCG_1642624A0A1W2PR95 340 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 BHMG1C9JSJ3 638 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 F5H5T6 163 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 TRDMT1O14717 391 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 DAPK3O43293 454 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 TNFSF14O43557 240 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ATP9BO43861 1147 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 OAZ2O95190 189 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 TDP2O95551 362 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 KLF8O95600 359 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 SERPINF2P08697 491 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 JMJD7P0C870 316 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 SLURP2P0DP57 97 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 HAPLN1P10915 354 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 GLRA2P23416 452 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 AKAP5P24588 427 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ANP32AP39687 249 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 HNRNPKP61978 463 aaKnown RBP eCLIP3□□□□□ -1.93
CLOCK-209ENST00000511124 GRIN1Q05586 938 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ENPEPQ07075 957 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 DSC1Q08554 894 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PON2Q15165 354 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 SHROOM1Q2M3G4 852 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 CLLU1OSQ5K130 101 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 TMEM63BQ5T3F8 832 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ERAP2Q6P179 960 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 UNQ6494/PRO21346Q6UXR6 183 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 RD3Q7Z3Z2 195 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 TMPRSS12Q86WS5 348 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ZNF513Q8N8E2 541 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 SNIP1Q8TAD8 396 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 DENND1AQ8TEH3 1009 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PIGOQ8TEQ8 1089 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 FAM149B1Q96BN6 582 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 TRMT2BQ96GJ1 504 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 CPB2Q96IY4 423 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ZNF668Q96K58 619 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 C8orf48Q96LL4 319 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 SERPINB11Q96P15 392 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 CATSPER2Q96P56 530 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 C17orf62Q9BQA9 187 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PLCD4Q9BRC7 762 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 C2orf49Q9BVC5 232 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 CHST7Q9NS84 486 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 TMEM63CQ9P1W3 806 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 KIAA1522Q9P206 1035 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 RASAL2Q9UJF2 1139 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 BOLA1Q9Y3E2 137 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 SLC38A8A6NNN8 435 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 HIDE1A8MVS5 230 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 ANHXE9PGG2 379 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 SLC7A4O43246 635 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 KAT7O95251 611 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 RRM1P23921 792 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 BRD2P25440 801 aaKnown RBP2.99□□□□□ -1.93
CLOCK-209ENST00000511124 CD82P27701 267 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 CD6P30203 668 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 GTF2H1P32780 548 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 NPTX2P47972 431 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 TUBP50607 506 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 POLR2LP62875 67 aaKnown RBP2.99□□□□□ -1.93
CLOCK-209ENST00000511124 ITGB3BPQ13352 177 aaPredicted RBP2.99□□□□□ -1.93
CLOCK-209ENST00000511124 GTF2H3Q13889 308 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 CAPSQ13938 189 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 ARHGEF7Q14155 803 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 TARBP2Q15633 366 aaKnown RBP2.99□□□□□ -1.93
CLOCK-209ENST00000511124 CLPPQ16740 277 aaPredicted RBP2.99□□□□□ -1.93
CLOCK-209ENST00000511124 INTS6LQ5JSJ4 861 aaKnown RBP2.99□□□□□ -1.93
CLOCK-209ENST00000511124 EFHC1Q5JVL4 640 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 SPATA1Q5VX52 437 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 PRSS55Q6UWB4 352 aaPredicted RBP2.99□□□□□ -1.93
CLOCK-209ENST00000511124 OOSP2Q86WS3 158 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 BRSK2Q8IWQ3 736 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 SCUBE3Q8IX30 993 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 FSTL5Q8N475 847 aaPredicted RBP2.99□□□□□ -1.93
CLOCK-209ENST00000511124 SYT2Q8N9I0 419 aaPredicted RBP2.99□□□□□ -1.93
CLOCK-209ENST00000511124 ZNF248Q8NDW4 579 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 PHC3Q8NDX5 983 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 FBXO18Q8NFZ0 1043 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 CADM4Q8NFZ8 388 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 SH3RF2Q8TEC5 729 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 ANP32BQ92688 251 aaKnown RBP2.99□□□□□ -1.93
CLOCK-209ENST00000511124 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.99□□□□□ -1.93
CLOCK-209ENST00000511124 AHCYL2Q96HN2 611 aaKnown RBP2.99□□□□□ -1.93
CLOCK-209ENST00000511124 SPATA17Q96L03 361 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 PURBQ96QR8 312 aaKnown RBP2.99□□□□□ -1.93
CLOCK-209ENST00000511124 ACO2Q99798 780 aaKnown RBP2.99□□□□□ -1.93
CLOCK-209ENST00000511124 ADAM33Q9BZ11 813 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 CDT1Q9H211 546 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 ELOVL2Q9NXB9 296 aa2.99□□□□□ -1.93
CLOCK-209ENST00000511124 CLEC1BQ9P126 229 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms