RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 PDILTQ8N807 584 aa24.35■■□□□ 1.49
SMAD5-207ENST00000511116 MDGA1Q8NFP4 955 aa24.35■■□□□ 1.49
SMAD5-207ENST00000511116 INTS4Q96HW7 963 aaKnown RBP24.35■■□□□ 1.49
SMAD5-207ENST00000511116 MMS19Q96T76 1030 aa24.35■■□□□ 1.49
SMAD5-207ENST00000511116 AGPAT3Q9NRZ7 376 aa24.35■■□□□ 1.49
SMAD5-207ENST00000511116 CPQQ9Y646 472 aa24.35■■□□□ 1.49
SMAD5-207ENST00000511116 PLXND1Q9Y4D7 1925 aa24.34■■□□□ 1.49
SMAD5-207ENST00000511116 SLC9A3R1O14745 358 aaPredicted RBP24.34■■□□□ 1.49
SMAD5-207ENST00000511116 HNRNPLP14866 589 aaKnown RBP eCLIP24.34■■□□□ 1.49
SMAD5-207ENST00000511116 SNRPFP62306 86 aaKnown RBP24.34■■□□□ 1.49
SMAD5-207ENST00000511116 EHHADHQ08426 723 aa24.34■■□□□ 1.49
SMAD5-207ENST00000511116 MESP2Q0VG99 397 aa24.34■■□□□ 1.49
SMAD5-207ENST00000511116 LINC00301Q8NCQ3 95 aa24.34■■□□□ 1.49
SMAD5-207ENST00000511116 CGRRF1Q99675 332 aa24.34■■□□□ 1.49
SMAD5-207ENST00000511116 TPSD1Q9BZJ3 242 aa24.34■■□□□ 1.49
SMAD5-207ENST00000511116 ELOVL4Q9GZR5 314 aa24.34■■□□□ 1.49
SMAD5-207ENST00000511116 ZSCAN16Q9H4T2 348 aaPredicted RBP24.34■■□□□ 1.49
SMAD5-207ENST00000511116 MYOFQ9NZM1 2061 aa24.34■■□□□ 1.49
SMAD5-207ENST00000511116 C4orf47A7E2U8 309 aa24.33■■□□□ 1.49
SMAD5-207ENST00000511116 PTPN1P18031 435 aaKnown RBP24.33■■□□□ 1.49
SMAD5-207ENST00000511116 BCKDHBP21953 392 aa24.33■■□□□ 1.49
SMAD5-207ENST00000511116 GBP1P32455 592 aa24.33■■□□□ 1.49
SMAD5-207ENST00000511116 SEC13P55735 322 aa24.33■■□□□ 1.49
SMAD5-207ENST00000511116 CYP24A1Q07973 514 aa24.33■■□□□ 1.49
SMAD5-207ENST00000511116 TAF10Q12962 218 aa24.33■■□□□ 1.49
SMAD5-207ENST00000511116 ANO7Q6IWH7 933 aa24.33■■□□□ 1.49
SMAD5-207ENST00000511116 PSAPL1Q6NUJ1 521 aa24.33■■□□□ 1.49
SMAD5-207ENST00000511116 RHBDF2Q6PJF5 856 aa24.33■■□□□ 1.49
SMAD5-207ENST00000511116 TMEM92Q6UXU6 159 aa24.33■■□□□ 1.49
SMAD5-207ENST00000511116 DUSP9Q99956 384 aaKnown RBP24.33■■□□□ 1.49
SMAD5-207ENST00000511116 XYLT2Q9H1B5 865 aa24.33■■□□□ 1.49
SMAD5-207ENST00000511116 SNX25Q9H3E2 840 aa24.33■■□□□ 1.49
SMAD5-207ENST00000511116 UBE4BO95155 1302 aa24.33■■□□□ 1.48
SMAD5-207ENST00000511116 KIR2DL1P43626 348 aaPredicted RBP24.32■■□□□ 1.48
SMAD5-207ENST00000511116 TDRD10Q5VZ19 366 aaKnown RBP24.32■■□□□ 1.48
SMAD5-207ENST00000511116 DDX42Q86XP3 938 aaKnown RBP eCLIP24.32■■□□□ 1.48
SMAD5-207ENST00000511116 SFTPA1Q8IWL2 248 aa24.32■■□□□ 1.48
SMAD5-207ENST00000511116 PHTF2Q8N3S3 785 aa24.32■■□□□ 1.48
SMAD5-207ENST00000511116 IL17RCQ8NAC3 791 aa24.32■■□□□ 1.48
SMAD5-207ENST00000511116 OVCA2Q8WZ82 227 aa24.32■■□□□ 1.48
SMAD5-207ENST00000511116 ZFRQ96KR1 1074 aaKnown RBP24.32■■□□□ 1.48
SMAD5-207ENST00000511116 SLITRK1Q96PX8 696 aa24.32■■□□□ 1.48
SMAD5-207ENST00000511116 PNKPQ96T60 521 aa24.32■■□□□ 1.48
SMAD5-207ENST00000511116 ZNF518BQ9C0D4 1074 aa24.32■■□□□ 1.48
SMAD5-207ENST00000511116 DPEP3Q9H4B8 488 aa24.32■■□□□ 1.48
SMAD5-207ENST00000511116 WASF3Q9UPY6 502 aa24.32■■□□□ 1.48
SMAD5-207ENST00000511116 INVSQ9Y283 1065 aa24.32■■□□□ 1.48
SMAD5-207ENST00000511116 TNRC6BQ9UPQ9 1833 aaKnown RBP24.32■■□□□ 1.48
SMAD5-207ENST00000511116 ZZEF1O43149 2961 aa24.32■■□□□ 1.48
SMAD5-207ENST00000511116 MYO18AQ92614 2054 aaKnown RBP24.31■■□□□ 1.48
SMAD5-207ENST00000511116 CDX4O14627 284 aaPredicted RBP24.31■■□□□ 1.48
SMAD5-207ENST00000511116 PPP6R2O75170 966 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 DLATP10515 647 aaKnown RBP24.31■■□□□ 1.48
SMAD5-207ENST00000511116 IGF2RP11717 2491 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 P2RY2P41231 377 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 SLC6A11P48066 632 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 WDR72Q3MJ13 1102 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 FAM26FQ5R3K3 315 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 DAB2IPQ5VWQ8 1189 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 C12orf40Q86WS4 652 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 CCDC33Q8N5R6 958 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 OR6B3Q8NGW1 331 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 ZNF516Q92618 1163 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 B3GNT5Q9BYG0 378 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 VRTNQ9H8Y1 702 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 SMPD4Q9NXE4 827 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 IL37Q9NZH6 218 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 CFAP97Q9P2B7 532 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 EVLQ9UI08 416 aaPredicted RBP24.31■■□□□ 1.48
SMAD5-207ENST00000511116 GON4LQ3T8J9 2241 aa24.31■■□□□ 1.48
SMAD5-207ENST00000511116 ASCC3Q8N3C0 2202 aaKnown RBP24.31■■□□□ 1.48
SMAD5-207ENST00000511116 FAM208BQ5VWN6 2430 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 KHNYNO15037 678 aaKnown RBP24.3■■□□□ 1.48
SMAD5-207ENST00000511116 KAT7O95251 611 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 TNNI1P19237 187 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 NOVA1P51513 510 aaKnown RBP24.3■■□□□ 1.48
SMAD5-207ENST00000511116 AMPD3Q01432 767 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 SNX30Q5VWJ9 437 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 HS2ST1Q7LGA3 356 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 CYP2U1Q7Z449 544 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 C12orf56Q8IXR9 622 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 ALLCQ8N6M5 410 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 XXYLT1Q8NBI6 393 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 B3GALNT2Q8NCR0 500 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 PDZD8Q8NEN9 1154 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 SCFD1Q8WVM8 642 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 OTUB2Q96DC9 234 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 FNBP1Q96RU3 617 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 C7orf25Q9BPX7 421 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 TBC1D14Q9P2M4 693 aa24.3■■□□□ 1.48
SMAD5-207ENST00000511116 ASPMQ8IZT6 3477 aa24.29■■□□□ 1.48
SMAD5-207ENST00000511116 E2F8A0AVK6 867 aa24.29■■□□□ 1.48
SMAD5-207ENST00000511116 SGK1O00141 431 aa24.29■■□□□ 1.48
SMAD5-207ENST00000511116 GIPC1O14908 333 aa24.29■■□□□ 1.48
SMAD5-207ENST00000511116 ALDH1A2O94788 518 aa24.29■■□□□ 1.48
SMAD5-207ENST00000511116 ADH1CP00326 375 aa24.29■■□□□ 1.48
SMAD5-207ENST00000511116 CSRP1P21291 193 aaKnown RBP24.29■■□□□ 1.48
SMAD5-207ENST00000511116 ATICP31939 592 aa24.29■■□□□ 1.48
SMAD5-207ENST00000511116 GRIA2P42262 883 aa24.29■■□□□ 1.48
SMAD5-207ENST00000511116 TNFRSF4P43489 277 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms