RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 GPR158Q5T848 1215 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 MBLAC2Q68D91 279 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 SLC30A6Q6NXT4 461 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 NEK5Q6P3R8 708 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 CCDC149Q6ZUS6 474 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 NCCRP1Q6ZVX7 275 aaPredicted RBP4.84□□□□□ -1.63
NIPBL-206ENST00000509429 NKAIN4Q8IVV8 208 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 TPH2Q8IWU9 490 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 FAM9CQ8IZT9 166 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 CRACR2BQ8N4Y2 399 aaPredicted RBP4.84□□□□□ -1.63
NIPBL-206ENST00000509429 RNF10Q8N5U6 811 aaKnown RBP4.84□□□□□ -1.63
NIPBL-206ENST00000509429 CELF2-AS1Q8N7Q2 184 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 DTX3Q8N9I9 347 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 CTCFLQ8NI51 663 aaPredicted RBP4.84□□□□□ -1.63
NIPBL-206ENST00000509429 OSBP2Q969R2 916 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 DHX58Q96C10 678 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 FAM167AQ96KS9 214 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 ATP6V1G3Q96LB4 118 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 NT5C1BQ96P26 610 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 CTAGE1Q96RT6 745 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 PIGSQ96S52 555 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 MYD88Q99836 296 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 GAL3ST1Q99999 423 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 RSRP1Q9BUV0 290 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 CCDC106Q9BWC9 280 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 SPZ1Q9BXG8 430 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 NT5C3AQ9H0P0 336 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 CCDC8Q9H0W5 538 aaPredicted RBP4.84□□□□□ -1.63
NIPBL-206ENST00000509429 BICC1Q9H694 974 aaKnown RBP4.84□□□□□ -1.63
NIPBL-206ENST00000509429 GRPEL1Q9HAV7 217 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 HPS4Q9NQG7 708 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 SLC5A4Q9NY91 659 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 MOCS1Q9NZB8 636 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 TBC1D14Q9P2M4 693 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 RBPJLQ9UBG7 517 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 EXTL2Q9UBQ6 330 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 TESQ9UGI8 421 aaKnown RBP4.84□□□□□ -1.63
NIPBL-206ENST00000509429 PRKAG3Q9UGI9 489 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 CHORDC1Q9UHD1 332 aaPredicted RBP4.84□□□□□ -1.63
NIPBL-206ENST00000509429 CLEC4AQ9UMR7 237 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 C19orf53Q9UNZ5 99 aaPredicted RBP4.84□□□□□ -1.63
NIPBL-206ENST00000509429 LRRIQ1Q96JM4 1722 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 LAMC3Q9Y6N6 1575 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 COL3A1P02461 1466 aaPredicted RBP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 GRIN2BQ13224 1484 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 TCOF1Q13428 1488 aaKnown RBP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 FANCD2Q9BXW9 1451 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 MYOM3Q5VTT5 1437 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 MYO3BQ8WXR4 1341 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 TARSL2A2RTX5 802 aaKnown RBP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 TRIM75PA6NK02 468 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 HGSO14964 777 aaPredicted RBP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 EXTL3O43909 919 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 RANBP6O60518 1105 aaKnown RBP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 MAFKO60675 156 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 ATP6V1G1O75348 118 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 TRIM16O95361 564 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 EYA4O95677 639 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 TBX18O95935 607 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 APOA4P06727 396 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 XRCC6P12956 609 aaKnown RBP eCLIP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 GCFC2P16383 781 aaKnown RBP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 ARF4P18085 180 aaPredicted RBP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 ABCG1P45844 678 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 NPTX2P47972 431 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 HNRNPH2P55795 449 aaKnown RBP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 PWP1Q13610 501 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 CUL2Q13617 745 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 PRKG1Q13976 671 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 NFE2L1Q14494 772 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 CRY1Q16526 586 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 DPY19L1Q2PZI1 675 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 CFAP221Q4G0U5 840 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 CCDC38Q502W7 563 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 ZMAT1Q5H9K5 638 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 DCAF17Q5H9S7 520 aaPredicted RBP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 KCNT1Q5JUK3 1230 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 FAM47EQ6ZV65 393 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 KRT74Q7RTS7 529 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 NANOGNBQ7Z5D8 188 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 DNAJB7Q7Z6W7 309 aaPredicted RBP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 GALNT7Q86SF2 657 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 NOSTRINQ8IVI9 506 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 SLC4A11Q8NBS3 891 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 CCDC150Q8NCX0 1101 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 PLBD2Q8NHP8 589 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 GOT1L1Q8NHS2 421 aaPredicted RBP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 RNF139Q8WU17 664 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 PPP1R14BQ96C90 147 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 VPS39Q96JC1 886 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 SPATA17Q96L03 361 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 HS6ST2Q96MM7 605 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 FNBP1Q96RU3 617 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 TXLNGYQ9BZA5 131 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 PSTPIP2Q9H939 334 aa4.83□□□□□ -1.64
NIPBL-206ENST00000509429 LIN28AQ9H9Z2 209 aaKnown RBP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 CLK4Q9HAZ1 481 aaKnown RBP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 AGO4Q9HCK5 861 aaKnown RBP4.83□□□□□ -1.64
NIPBL-206ENST00000509429 XAB2Q9HCS7 855 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms