RNA–Protein interactions for RNA: ENST00000508869.5

TMCC1-208, Transcript of transmembrane and coiled-coil domain family 1, human

TSL 3

Gene TMCC1, Length 467 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMCC1-208	ENST00000508869	SH2D3C	Q8N5H7	860 aa		4.89	□□□□□ -1.63
TMCC1-208	ENST00000508869	C3orf20	Q8ND61	904 aa		4.89	□□□□□ -1.63
TMCC1-208	ENST00000508869	SIMC1	Q8NDZ2	872 aa		4.89	□□□□□ -1.63
TMCC1-208	ENST00000508869	HSPBAP1	Q96EW2	488 aa		4.89	□□□□□ -1.63
TMCC1-208	ENST00000508869	BRINP2	Q9C0B6	783 aa		4.89	□□□□□ -1.63
TMCC1-208	ENST00000508869	KCTD5	Q9NXV2	234 aa		4.89	□□□□□ -1.63
TMCC1-208	ENST00000508869	FOXJ2	Q9P0K8	574 aa		4.89	□□□□□ -1.63
TMCC1-208	ENST00000508869	ABCF2	Q9UG63	623 aa		4.89	□□□□□ -1.63
TMCC1-208	ENST00000508869	TAF1	P21675	1872 aa		4.89	□□□□□ -1.63
TMCC1-208	ENST00000508869	RNF123	Q5XPI4	1314 aa		4.89	□□□□□ -1.63
TMCC1-208	ENST00000508869	DLG5	Q8TDM6	1919 aa		4.89	□□□□□ -1.63
TMCC1-208	ENST00000508869	COL4A1	P02462	1669 aa		4.89	□□□□□ -1.63
TMCC1-208	ENST00000508869	ABCC12	Q96J65	1359 aa		4.89	□□□□□ -1.63
TMCC1-208	ENST00000508869	SCN9A	Q15858	1988 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	PRAMEF33	A0A0G2JMD5	474 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869		A0A1W2PS29	197 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	PRAMEF10	O60809	474 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	VPS4B	O75351	444 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	RPLP2	P05387	115 aa	Known RBP	4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	LPO	P22079	712 aa	Predicted RBP	4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	SMARCA1	P28370	1054 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	IL6ST	P40189	918 aa	Predicted RBP	4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	MAP2K6	P52564	334 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	SIM1	P81133	766 aa	Predicted RBP	4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	EXOSC10	Q01780	885 aa	Known RBP	4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	ZNF844	Q08AG5	666 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	NOG	Q13253	232 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	TMEM240	Q5SV17	173 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	SULT6B1	Q6IMI4	303 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	HEATR3	Q7Z4Q2	680 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	FAM90A1	Q86YD7	464 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	CNTROB	Q8N137	903 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	LNX2	Q8N448	690 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	NTN5	Q8WTR8	489 aa	Predicted RBP	4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	LPIN2	Q92539	896 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	RGMA	Q96B86	450 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	CHMP4C	Q96CF2	233 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	TRIB1	Q96RU8	372 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	SMOC2	Q9H3U7	446 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	R3HDML	Q9H3Y0	253 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	HACL1	Q9UJ83	578 aa		4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	RANBP2	P49792	3224 aa	Known RBP	4.88	□□□□□ -1.63
TMCC1-208	ENST00000508869	DDX60	Q8IY21	1712 aa	Known RBP	4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	hCG_2014768	A0A024R1R8	64 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	CCDC195	A0A1B0GUA6	201 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	TOR1B	O14657	336 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	ALDH1L1	O75891	902 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	AHSG	P02765	367 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	FTL	P02792	175 aa	Predicted RBP	4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	GJB1	P08034	283 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	PF4V1	P10720	104 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	CHRM3	P20309	590 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	TNNT2	P45379	298 aa	Predicted RBP	4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	ZNF135	P52742	658 aa	Predicted RBP	4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	HK3	P52790	923 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	BLOC1S1	P78537	153 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	MAP2K1	Q02750	393 aa	Predicted RBP	4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	DYRK1A	Q13627	763 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	MTHFSD	Q2M296	383 aa	Known RBP	4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	DEFB115	Q30KQ5	88 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	CRY2	Q49AN0	593 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	C1orf141	Q5JVX7	400 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	SP5	Q6BEB4	398 aa	Predicted RBP	4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	TAPT1	Q6NXT6	567 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	TMPRSS9	Q7Z410	1059 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	CLNK	Q7Z7G1	428 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	ZNF575	Q86XF7	245 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	PPP1R3B	Q86XI6	285 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	ADGRG5	Q8IZF4	528 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	GPC2	Q8N158	579 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	CNBD1	Q8NA66	436 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	TFAP2B	Q92481	460 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	TNPO1	Q92973	898 aa	Known RBP	4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	MASTL	Q96GX5	879 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	CAPNS2	Q96L46	248 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	BBC3	Q96PG8	261 aa	Predicted RBP	4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	BRD9	Q9H8M2	597 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	MAN1C1	Q9NR34	630 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	IL17RB	Q9NRM6	502 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	INTS13	Q9NVM9	706 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	PCDHA1	Q9Y5I3	950 aa		4.87	□□□□□ -1.63
TMCC1-208	ENST00000508869	LAMA3	Q16787	3333 aa		4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	YY2	O15391	372 aa		4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	KIF20A	O95235	890 aa		4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	MATN4	O95460	622 aa		4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	PPP3CB	P16298	524 aa		4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	PIK3CG	P48736	1102 aa		4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	RPS7	P62081	194 aa	Known RBP	4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	MRPS35	P82673	323 aa	Known RBP	4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	BOP1	Q14137	746 aa	Known RBP	4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	ZNF267	Q14586	743 aa	Predicted RBP	4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	TTF1	Q15361	905 aa	Predicted RBP	4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	PGS1	Q32NB8	556 aa		4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	PREPL	Q4J6C6	727 aa	Predicted RBP	4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	STRIP1	Q5VSL9	837 aa		4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	FBXO42	Q6P3S6	717 aa		4.86	□□□□□ -1.63
TMCC1-208	ENST00000508869	ZNF790	Q6PG37	636 aa		4.86	□□□□□ -1.63

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