RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 LEFTY2O00292 366 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 CLDN5O00501 218 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 SLC9A3R1O14745 358 aaPredicted RBP10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 IKBKBO14920 756 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 HRO43593 1189 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 RNF40O75150 1001 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 EGFP01133 1207 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 C4BPAP04003 597 aaKnown RBP10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 RETP07949 1114 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 MBL2P11226 248 aaPredicted RBP10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 KRT13P13646 458 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 RAP1GAPP47736 663 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 CLDN10P78369 228 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 ARHGAP8P85298 464 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 LMNB2Q03252 620 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 ZNF77Q15935 545 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 RSPO4Q2I0M5 234 aaPredicted RBP10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 EML3Q32P44 896 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 PDCD7Q8N8D1 485 aaKnown RBP10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 PDZD8Q8NEN9 1154 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 PLEKHO2Q8TD55 490 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 TAF4BQ92750 862 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 CD101Q93033 1021 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 FBXO32Q969P5 355 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 RMDN1Q96DB5 314 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 TTLL2Q9BWV7 592 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 IMPG2Q9BZV3 1241 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 NACA2Q9H009 215 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 LINC00597Q9H2U6 94 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 KCTD10Q9H3F6 313 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 VRTNQ9H8Y1 702 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 SMPD4Q9NXE4 827 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 MAPK8IP1Q9UQF2 711 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 HPSEQ9Y251 543 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 ZDHHC9Q9Y397 364 aa10.72□□□□□ -0.69
UBE2D3-227ENST00000508818 CFAP54Q96N23 3096 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 A0A1W2PQ27 194 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 A0A1W2PQ64 194 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 A0A1W2PQD8 194 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 K7ESF4 209 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 CCDC192P0DO97 292 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 TCF3P15923 654 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 NR2F2P24468 414 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 HOXA6P31267 233 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 PIK3CAP42336 1068 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 VAMP7P51809 220 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 DLG4P78352 724 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 SLC7A9P82251 487 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 DMWDQ09019 674 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 SPEM2Q0P670 501 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 USP4Q13107 963 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 SRSF5Q13243 272 aaKnown RBP10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 BECN1Q14457 450 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 ZACNQ401N2 412 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 WDR44Q5JSH3 913 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 HECTD3Q5T447 861 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 KRBA2Q6ZNG9 492 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 INTS8Q75QN2 995 aaKnown RBP10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 SV2AQ7L0J3 742 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 ACOT1Q86TX2 421 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 WDR5BQ86VZ2 330 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 DDX42Q86XP3 938 aaKnown RBP eCLIP10.71□□□□□ -0.694e-7■■■□□ 18.4
UBE2D3-227ENST00000508818 RIN3Q8TB24 985 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 TMEM174Q8WUU8 243 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 CHFRQ96EP1 664 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 SMARCD1Q96GM5 515 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 CHAMP1Q96JM3 812 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 GZF1Q9H116 711 aaPredicted RBP10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 FBRSL1Q9HCM7 1045 aaKnown RBP10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 DMAP1Q9NPF5 467 aaPredicted RBP10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 C2orf42Q9NWW7 574 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 CFAP97Q9P2B7 532 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 CHORDC1Q9UHD1 332 aaPredicted RBP10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 TRAF3IP3Q9Y228 551 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 NME7Q9Y5B8 376 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 CPQQ9Y646 472 aa10.71□□□□□ -0.69
UBE2D3-227ENST00000508818 DENND4CQ5VZ89 1909 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 VPS13AQ96RL7 3174 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 MAPK13O15264 365 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 RPP40O75818 363 aaKnown RBP10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 AP1G2O75843 785 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 RHOBTB3O94955 611 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 ZNF202O95125 648 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 VNN1O95497 513 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 HLA-DRAP01903 254 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 PSMC2P35998 433 aaKnown RBP10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 PXNP49023 591 aaPredicted RBP10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 NDST1P52848 882 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 CACNA2D1P54289 1103 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 DPYDQ12882 1025 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 ADAM9Q13443 819 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 CACNA2D4Q7Z3S7 1137 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 FILIP1Q7Z7B0 1213 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 FAM35AQ86V20 835 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 UNC93AQ86WB7 457 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 FAM186BQ8IYM0 893 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 CAMKK1Q8N5S9 505 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 OVCA2Q8WZ82 227 aa10.7□□□□□ -0.7
UBE2D3-227ENST00000508818 ACDQ96AP0 544 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms