RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 SERPINF2P08697 491 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 GARTP22102 1010 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 ITPKAP23677 461 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 LONP1P36776 959 aaKnown RBP17.58■□□□□ 0.4
SNF8-205ENST00000507302 GRIA2P42262 883 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 MAPK8P45983 427 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 GRIN1Q05586 938 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 DUOXA1Q1HG43 343 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 LYSMD4Q5XG99 296 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 DENND5BQ6ZUT9 1274 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 SFR1Q86XK3 245 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 SCN4BQ8IWT1 228 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 CSGALNACT2Q8N6G5 542 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 FAM213AQ9BRX8 229 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 CD248Q9HCU0 757 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 TRPM5Q9NZQ8 1165 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 SEL1LQ9UBV2 794 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 CDH9Q9ULB4 789 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 SNX9Q9Y5X1 595 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 PLXNB3Q9ULL4 1909 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 GJB3O75712 270 aa17.57■□□□□ 0.4
SNF8-205ENST00000507302 LDHAP00338 332 aaKnown RBP17.57■□□□□ 0.4
SNF8-205ENST00000507302 APODP05090 189 aa17.57■□□□□ 0.4
SNF8-205ENST00000507302 KRT18P05783 430 aaKnown RBP17.57■□□□□ 0.4
SNF8-205ENST00000507302 CD59P13987 128 aa17.57■□□□□ 0.4
SNF8-205ENST00000507302 LMO2P25791 158 aa17.57■□□□□ 0.4
SNF8-205ENST00000507302 FAM193AP78312 1265 aa17.57■□□□□ 0.4
SNF8-205ENST00000507302 RBP5P82980 135 aa17.57■□□□□ 0.4
SNF8-205ENST00000507302 HNRNPDQ14103 355 aaKnown RBP17.57■□□□□ 0.4
SNF8-205ENST00000507302 L1TD1Q5T7N2 865 aaKnown RBP17.57■□□□□ 0.4
SNF8-205ENST00000507302 EMC10Q5UCC4 262 aa17.57■□□□□ 0.4
SNF8-205ENST00000507302 ETFBKMTQ8IXQ9 262 aa17.57■□□□□ 0.4
SNF8-205ENST00000507302 SYT15Q9BQS2 421 aa17.57■□□□□ 0.4
SNF8-205ENST00000507302 ZHX3Q9H4I2 956 aa17.57■□□□□ 0.4
SNF8-205ENST00000507302 DNAAF2Q9NVR5 837 aaKnown RBP17.57■□□□□ 0.4
SNF8-205ENST00000507302 EHD2Q9NZN4 543 aa17.57■□□□□ 0.4
SNF8-205ENST00000507302 MAGEC2Q9UBF1 373 aaPredicted RBP17.57■□□□□ 0.4
SNF8-205ENST00000507302 KIF3AQ9Y496 699 aa17.57■□□□□ 0.4
SNF8-205ENST00000507302 GPSM3Q9Y4H4 160 aa17.57■□□□□ 0.4
SNF8-205ENST00000507302 MAP3K13O43283 966 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 TIE1P35590 1138 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 MAPRE1Q15691 268 aaKnown RBP17.56■□□□□ 0.4
SNF8-205ENST00000507302 ZNF423Q2M1K9 1284 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 MCTP1Q6DN14 999 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 ARMCX6Q7L4S7 300 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 RABEPKQ7Z6M1 372 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 TTC16Q8NEE8 873 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 MYLPFQ96A32 169 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 DNAJC19Q96DA6 116 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 FAM84AQ96KN4 292 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 C8orf48Q96LL4 319 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 OLFML3Q9NRN5 406 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 RBAKQ9NYW8 714 aaPredicted RBP17.56■□□□□ 0.4
SNF8-205ENST00000507302 HCN2Q9UL51 889 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 CPQQ9Y646 472 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 CELSR3Q9NYQ7 3312 aa17.56■□□□□ 0.4
SNF8-205ENST00000507302 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.55■□□□□ 0.4
SNF8-205ENST00000507302 AP5Z1O43299 807 aa17.55■□□□□ 0.4
SNF8-205ENST00000507302 WARSP23381 471 aaKnown RBP17.55■□□□□ 0.4
SNF8-205ENST00000507302 BDNFP23560 247 aa17.55■□□□□ 0.4
SNF8-205ENST00000507302 RESTQ13127 1097 aa17.55■□□□□ 0.4
SNF8-205ENST00000507302 SLC14A1Q13336 389 aa17.55■□□□□ 0.4
SNF8-205ENST00000507302 KRI1Q8N9T8 703 aaKnown RBP17.55■□□□□ 0.4
SNF8-205ENST00000507302 MYCBPAPQ8TBZ2 947 aa17.55■□□□□ 0.4
SNF8-205ENST00000507302 HMGB4Q8WW32 186 aa17.55■□□□□ 0.4
SNF8-205ENST00000507302 OTUB2Q96DC9 234 aa17.55■□□□□ 0.4
SNF8-205ENST00000507302 SAAL1Q96ER3 474 aa17.55■□□□□ 0.4
SNF8-205ENST00000507302 PCED1BQ96HM7 432 aa17.55■□□□□ 0.4
SNF8-205ENST00000507302 ZFRQ96KR1 1074 aaKnown RBP17.55■□□□□ 0.4
SNF8-205ENST00000507302 ARHGEF4Q9NR80 690 aa17.55■□□□□ 0.4
SNF8-205ENST00000507302 EXOC7Q9UPT5 735 aa17.55■□□□□ 0.4
SNF8-205ENST00000507302 STARD13Q9Y3M8 1113 aa17.55■□□□□ 0.4
SNF8-205ENST00000507302 NME7Q9Y5B8 376 aa17.55■□□□□ 0.4
SNF8-205ENST00000507302 PTPRJQ12913 1337 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 ATXN2Q99700 1313 aaKnown RBP17.54■□□□□ 0.4
SNF8-205ENST00000507302 PTPRBP23467 1997 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 TCRBV21S2A2A0A5A6 115 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 E2F8A0AVK6 867 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 ARHGAP33O14559 1287 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 TRIM66O15016 1216 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 BMP15O95972 392 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 ADH1CP00326 375 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 ADH5P11766 374 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 GABRG2P18507 467 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 GFPT1Q06210 699 aaPredicted RBP17.54■□□□□ 0.4
SNF8-205ENST00000507302 SLC36A4Q6YBV0 504 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 DDX42Q86XP3 938 aaKnown RBP eCLIP17.54■□□□□ 0.4
SNF8-205ENST00000507302 HDDC3Q8N4P3 179 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 CHCHD4Q8N4Q1 142 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 ACCSQ96QU6 501 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 MTMR12Q9C0I1 747 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 PDE11AQ9HCR9 933 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 TMEM30AQ9NV96 361 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 INTS13Q9NVM9 706 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 TBC1D14Q9P2M4 693 aa17.54■□□□□ 0.4
SNF8-205ENST00000507302 SETXQ7Z333 2677 aaKnown RBP17.53■□□□□ 0.4
SNF8-205ENST00000507302 A0A1W2PQF6 199 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 FRMD3A2A2Y4 597 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 HOXC11O43248 304 aaPredicted RBP17.53■□□□□ 0.4
SNF8-205ENST00000507302 OPHN1O60890 802 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms