RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 FBXO32Q969P5 355 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 CYFIP2Q96F07 1278 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 MSANTD3Q96H12 275 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 SMOQ99835 787 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 SRRTQ9BXP5 876 aaKnown RBP16.47■□□□□ 0.23
MED28-204ENST00000506409 FAM124BQ9H5Z6 455 aaPredicted RBP16.47■□□□□ 0.23
MED28-204ENST00000506409 CSNK1G1Q9HCP0 422 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 CISHQ9NSE2 258 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 GTSE1Q9NYZ3 720 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 GCNT4Q9P109 453 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 NDRG2Q9UN36 371 aaKnown RBP16.47■□□□□ 0.23
MED28-204ENST00000506409 MIA3Q5JRA6 1907 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 ANAPC1Q9H1A4 1944 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 TNFRSF10BO14763 440 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 BEST1O76090 585 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 FGFR1OPO95684 399 aaKnown RBP16.46■□□□□ 0.23
MED28-204ENST00000506409 TNK2Q07912 1038 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 CETN1Q12798 172 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 CUL2Q13617 745 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 ANGPT1Q15389 498 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 PDZD8Q8NEN9 1154 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 ZMIZ2Q8NF64 920 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 TTC8Q8TAM2 541 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 RIN3Q8TB24 985 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 OVCA2Q8WZ82 227 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 ATOH1Q92858 354 aaPredicted RBP16.46■□□□□ 0.23
MED28-204ENST00000506409 GBP4Q96PP9 640 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 NUP62CLQ9H1M0 184 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 C8orf33Q9H7E9 229 aaPredicted RBP16.46■□□□□ 0.23
MED28-204ENST00000506409 GKN1Q9NS71 199 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 RWDD2AQ9UIY3 292 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 ARHGAP26Q9UNA1 814 aa16.46■□□□□ 0.23
MED28-204ENST00000506409 PMM2O15305 246 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 SOX9P48436 509 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 MARSP56192 900 aaKnown RBP16.45■□□□□ 0.22
MED28-204ENST00000506409 LRMPQ12912 555 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 MTF1Q14872 753 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 ZNF77Q15935 545 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 C1orf228Q6PIY5 440 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 CLEC20AQ6ZU45 233 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 TRIM59Q8IWR1 403 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 MLKLQ8NB16 471 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 SH3RF2Q8TEC5 729 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 TMEM176AQ96HP8 235 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 HEXIM2Q96MH2 286 aaKnown RBP16.45■□□□□ 0.22
MED28-204ENST00000506409 FAM83CQ9BQN1 747 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 LMBRD1Q9NUN5 540 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 COMMD8Q9NX08 183 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 IL37Q9NZH6 218 aa16.45■□□□□ 0.22
MED28-204ENST00000506409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.45■□□□□ 0.22
MED28-204ENST00000506409 MYH10P35580 1976 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 SPECC1L-ADORA2AF8WAN1 911 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 P4HA2O15460 535 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 OAS1P00973 400 aaKnown RBP16.44■□□□□ 0.22
MED28-204ENST00000506409 CCDC192P0DO97 292 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 TBXAS1P24557 533 aaPredicted RBP16.44■□□□□ 0.22
MED28-204ENST00000506409 CTHP32929 405 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 MAGEA9P43362 315 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 RAD23BP54727 409 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 YWHAEP62258 255 aaKnown RBP16.44■□□□□ 0.22
MED28-204ENST00000506409 USP4Q13107 963 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 ITPRIPL2Q3MIP1 535 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 PPP1R26Q5T8A7 1209 aaPredicted RBP16.44■□□□□ 0.22
MED28-204ENST00000506409 TRIM68Q6AZZ1 485 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 RALGPS2Q86X27 583 aaPredicted RBP16.44■□□□□ 0.22
MED28-204ENST00000506409 C1orf210Q8IVY1 113 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 SLC4A11Q8NBS3 891 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 JAKMIP2Q96AA8 810 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 CLDN23Q96B33 292 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 NT5C1BQ96P26 610 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 IPO9Q96P70 1041 aaKnown RBP16.44■□□□□ 0.22
MED28-204ENST00000506409 RNF38Q9H0F5 515 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 FBXO44Q9H4M3 255 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 EBF3Q9H4W6 596 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 HPS4Q9NQG7 708 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 FAM86C1Q9NVL1 165 aa16.44■□□□□ 0.22
MED28-204ENST00000506409 CHORDC1Q9UHD1 332 aaPredicted RBP16.44■□□□□ 0.22
MED28-204ENST00000506409 KIF26AQ9ULI4 1882 aaPredicted RBP16.44■□□□□ 0.22
MED28-204ENST00000506409 FAM92AA1XBS5 289 aa16.43■□□□□ 0.22
MED28-204ENST00000506409 OLFM2O95897 454 aa16.43■□□□□ 0.22
MED28-204ENST00000506409 AFPP02771 609 aaKnown RBP16.43■□□□□ 0.22
MED28-204ENST00000506409 TCF3P15923 654 aa16.43■□□□□ 0.22
MED28-204ENST00000506409 RPS9P46781 194 aaKnown RBP16.43■□□□□ 0.22
MED28-204ENST00000506409 SLC7A9P82251 487 aa16.43■□□□□ 0.22
MED28-204ENST00000506409 KCNH2Q12809 1159 aa16.43■□□□□ 0.22
MED28-204ENST00000506409 RUNX3Q13761 415 aa16.43■□□□□ 0.22
MED28-204ENST00000506409 PDGFRLQ15198 375 aa16.43■□□□□ 0.22
MED28-204ENST00000506409 ZNF687Q8N1G0 1237 aa16.43■□□□□ 0.22
MED28-204ENST00000506409 OSCP1Q8WVF1 389 aa16.43■□□□□ 0.22
MED28-204ENST00000506409 DUSP16Q9BY84 665 aa16.43■□□□□ 0.22
MED28-204ENST00000506409 PNPLA8Q9NP80 782 aa16.43■□□□□ 0.22
MED28-204ENST00000506409 SPATA6Q9NWH7 488 aaPredicted RBP16.43■□□□□ 0.22
MED28-204ENST00000506409 GMIPQ9P107 970 aa16.43■□□□□ 0.22
MED28-204ENST00000506409 HHLA1C9JL84 531 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 GOLGA6L22H0YM25 854 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 MBL2P11226 248 aaPredicted RBP16.42■□□□□ 0.22
MED28-204ENST00000506409 ARSAP15289 507 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 IFNAR2P48551 515 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 ZXDBP98169 803 aa16.42■□□□□ 0.22
MED28-204ENST00000506409 FZD5Q13467 585 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms